RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 INPP5AQ14642 412 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 TMEM220Q6QAJ8 160 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 SBSNQ6UWP8 590 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 CYHR1Q6ZMK1 362 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 ADAMTSL2Q86TH1 951 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 EXT2Q93063 718 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 ZNF514Q96K75 400 aaPredicted RBP20.44■□□□□ 0.86
PNKP-203ENST00000593946 TMEM237Q96Q45 408 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 BTBD1Q9H0C5 482 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 CYP4F12Q9HCS2 524 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 NCKIPSDQ9NZQ3 722 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 RAD51BO15315 384 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 NUAK1O60285 661 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 HSPA14Q0VDF9 509 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 BOP1Q14137 746 aaKnown RBP20.44■□□□□ 0.86
PNKP-203ENST00000593946 TRIM69Q86WT6 500 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 OR2T34Q8NGX1 318 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 ELMO1Q92556 727 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 PHF21BQ96EK2 531 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 CCM2Q9BSQ5 444 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 DRC3Q9H069 523 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 SGK2Q9HBY8 427 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 TSR3Q9UJK0 312 aaKnown RBP20.44■□□□□ 0.86
PNKP-203ENST00000593946 CDYLQ9Y232 598 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 ZFC3H1O60293 1989 aaKnown RBP20.43■□□□□ 0.86
PNKP-203ENST00000593946 TMEM202A6NGA9 273 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 SUPT3HB4E1H0 165 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 C10orf142B7Z368 130 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 KLK8O60259 260 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 SUPT3HO75486 399 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 GPC4O75487 556 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 ZNF8P17098 575 aaPredicted RBP20.43■□□□□ 0.86
PNKP-203ENST00000593946 MAT2AP31153 395 aaKnown RBP20.43■□□□□ 0.86
PNKP-203ENST00000593946 SF3A3Q12874 501 aaKnown RBP eCLIP20.43■□□□□ 0.863e-6■■■□□ 19.1
PNKP-203ENST00000593946 GTF2H3Q13889 308 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 RCN2Q14257 317 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 PPP1R3AQ16821 1122 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 ZNF658BQ4V348 819 aaPredicted RBP20.43■□□□□ 0.86
PNKP-203ENST00000593946 GPSM1Q86YR5 675 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 CRLF3Q8IUI8 442 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 CACNA2D3Q8IZS8 1091 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 ASZ1Q8WWH4 475 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 L3HYPDHQ96EM0 354 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 MOCOSQ96EN8 888 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 LGR4Q9BXB1 951 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 WDR26Q9H7D7 661 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 TBC1D17Q9HA65 648 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 GPR34Q9UPC5 381 aa20.43■□□□□ 0.86
PNKP-203ENST00000593946 LRRC72A6NJI9 287 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 NPHS1O60500 1241 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 SLCO2B1O94956 709 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 TROVE2P10155 538 aaKnown RBP eCLIP20.42■□□□□ 0.86
PNKP-203ENST00000593946 IMPDH1P20839 514 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 IGFALSP35858 605 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 HK3P52790 923 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 TGFBIQ15582 683 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 TMEM31Q5JXX7 168 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 ANO7Q6IWH7 933 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 TRAPPC5Q8IUR0 188 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 VRK3Q8IV63 474 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 ZNF547Q8IVP9 402 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 PGBD3Q8N328 593 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 CCNYL1Q8N7R7 359 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 LINC00615Q96LM1 132 aaPredicted RBP20.42■□□□□ 0.86
PNKP-203ENST00000593946 FAM126AQ9BYI3 521 aaPredicted RBP20.42■□□□□ 0.86
PNKP-203ENST00000593946 TRIM55Q9BYV6 548 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 NPHS2Q9NP85 383 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 ACSS2Q9NR19 701 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 KLHL14Q9P2G3 628 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 TMCO1Q9UM00 188 aa20.42■□□□□ 0.86
PNKP-203ENST00000593946 CHUKO15111 745 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 MPC1LP0DKB6 136 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 GFAPP14136 432 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 SERPINB5P36952 375 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 HERVK_113P63132 956 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 PFKFB4Q16877 469 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 NEK10Q6ZWH5 1172 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 FBXO39Q8N4B4 442 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 PTGR2Q8N8N7 351 aaPredicted RBP20.41■□□□□ 0.86
PNKP-203ENST00000593946 CCDC197Q8NCU1 140 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 TSTD1Q8NFU3 115 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 PPP4R1Q8TF05 950 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 THOC1Q96FV9 657 aaKnown RBP20.41■□□□□ 0.86
PNKP-203ENST00000593946 ERVK-6Q9BXR3 956 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 GULP1Q9UBP9 304 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 ADAMTS6Q9UKP5 1117 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 TMEM98Q9Y2Y6 226 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 OR1A2Q9Y585 309 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 SLC5A10A0PJK1 596 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 SLC31A1O15431 190 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 HSPA4LO95757 839 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 GSTM1P09488 218 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 GSTM4Q03013 218 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 ZNF678Q5SXM1 525 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 LSMEM2Q8N112 164 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 DENND6BQ8NEG7 585 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 DLG3Q92796 817 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 CNDP1Q96KN2 507 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 HHIPQ96QV1 700 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 PHPT1Q9NRX4 125 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms