RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SNRNP200O75643 2136 aaKnown RBP14.43□□□□□ -0.1
PNKP-202ENST00000593706 DNAJB5O75953 348 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 PBLDP30039 288 aaPredicted RBP14.43□□□□□ -0.1
PNKP-202ENST00000593706 CD97P48960 835 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 WASHC5Q12768 1159 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 TFDP2Q14188 446 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 KCNAB1Q14722 419 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 PPP2R5EQ16537 467 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 TFDP3Q5H9I0 405 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 DNTTIP2Q5QJE6 756 aaKnown RBP14.43□□□□□ -0.1
PNKP-202ENST00000593706 PWWP2BQ6NUJ5 590 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 B4GALNT4Q76KP1 1039 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 C11orf96Q7Z7L8 435 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 AMZ2Q86W34 360 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 TTC30BQ8N4P2 665 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 BRSK1Q8TDC3 778 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 RAB33BQ9H082 229 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 GLOD4Q9HC38 313 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 UBP1Q9NZI7 540 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 PSMD13Q9UNM6 376 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 WDR37Q9Y2I8 494 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 NUP210LQ5VU65 1888 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 ITPR2Q14571 2701 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 GRID2IPA4D2P6 1211 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 TTLL8A6PVC2 850 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 VPS4BO75351 444 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 ZRANB2O95218 330 aaKnown RBP eCLIP14.42□□□□□ -0.1
PNKP-202ENST00000593706 EBLN1P0CF75 366 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 FOLR1P15328 257 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 PTPN3P26045 913 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 CD68P34810 354 aaPredicted RBP14.42□□□□□ -0.1
PNKP-202ENST00000593706 VAV2P52735 878 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 RPS18P62269 152 aaKnown RBP14.42□□□□□ -0.1
PNKP-202ENST00000593706 PDE1BQ01064 536 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 ACY1Q03154 408 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 LLGL1Q15334 1064 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 BBS12Q6ZW61 710 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 DAAM2Q86T65 1068 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 APLFQ8IW19 511 aaPredicted RBP14.42□□□□□ -0.1
PNKP-202ENST00000593706 RCOR2Q8IZ40 523 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 SLC41A2Q96JW4 573 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 ZNF514Q96K75 400 aaPredicted RBP14.42□□□□□ -0.1
PNKP-202ENST00000593706 CALR3Q96L12 384 aaKnown RBP14.42□□□□□ -0.1
PNKP-202ENST00000593706 QKIQ96PU8 341 aaKnown RBP eCLIP14.42□□□□□ -0.1
PNKP-202ENST00000593706 BAG1Q99933 345 aaPredicted RBP14.42□□□□□ -0.1
PNKP-202ENST00000593706 ANP32EQ9BTT0 268 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 FGF21Q9NSA1 209 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 IMP3Q9NV31 184 aaKnown RBP14.42□□□□□ -0.1
PNKP-202ENST00000593706 IMPACTQ9P2X3 320 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 TMPRSS11EQ9UL52 423 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 VPS4AQ9UN37 437 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 PCDHA3Q9Y5H8 950 aa14.42□□□□□ -0.1
PNKP-202ENST00000593706 A0A0U1RQJ8 604 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 UBA6A0AVT1 1052 aaPredicted RBP14.41□□□□□ -0.1
PNKP-202ENST00000593706 TLCD2A6NGC4 264 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 CPNE3O75131 537 aaKnown RBP14.41□□□□□ -0.1
PNKP-202ENST00000593706 RECKO95980 971 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 CTNNA2P26232 953 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 PTPN7P35236 360 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 HMGCLP35914 325 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 SPAM1P38567 509 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 PGDP52209 483 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 RPS15P62841 145 aaKnown RBP14.41□□□□□ -0.1
PNKP-202ENST00000593706 XRCC4Q13426 336 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 SEMA5AQ13591 1074 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 NOMO1Q15155 1222 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 TEX44Q53QW1 395 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 LDLRAP1Q5SW96 308 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 ZDHHC20Q5W0Z9 365 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 CPZQ66K79 652 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 FAM199XQ6PEV8 388 aaPredicted RBP14.41□□□□□ -0.1
PNKP-202ENST00000593706 FAM151BQ6UXP7 276 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 TMEM126BQ8IUX1 230 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 TFB1MQ8WVM0 346 aaKnown RBP14.41□□□□□ -0.1
PNKP-202ENST00000593706 ALG3Q92685 438 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 RBM41Q96IZ5 413 aaKnown RBP14.41□□□□□ -0.1
PNKP-202ENST00000593706 TEKT5Q96M29 485 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 FCRL4Q96PJ5 515 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 PSMG3-AS1Q96PY0 264 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 RUFY1Q96T51 708 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 MAP3K3Q99759 626 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 GPR87Q9BY21 358 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 TRIM55Q9BYV6 548 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 TRABDQ9H4I3 376 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 SOHLH2Q9NX45 425 aa14.41□□□□□ -0.1
PNKP-202ENST00000593706 GLYATL1P3A0A0U1RQE8 302 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 OR2AG2A6NM03 316 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 GPR39O43194 453 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 KCNJ13O60928 360 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 SCRG1O75711 98 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 POP7O75817 140 aaKnown RBP14.4□□□□□ -0.1
PNKP-202ENST00000593706 AGFG2O95081 481 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 PDGFAP04085 211 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 PTPN4P29074 926 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 AKT1P31749 480 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 UQCRFS1P47985 274 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 COPS2P61201 443 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 DMPKQ09013 629 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 CHAF1BQ13112 559 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 RPE65Q16518 533 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms