RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 PMS2P54278 862 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 HADHBP55084 474 aaKnown RBP23.39■■□□□ 1.33
LSM4-202ENST00000593564 ACY1Q03154 408 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 UBAP2LQ14157 1087 aaKnown RBP23.39■■□□□ 1.33
LSM4-202ENST00000593564 KCNAB1Q14722 419 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 PLCL1Q15111 1095 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 METRNLQ641Q3 311 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 PWWP2BQ6NUJ5 590 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 MAP3K3Q99759 626 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 TWSG1Q9GZX9 223 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 ANKMY1Q9P2S6 941 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 TRHDEQ9UKU6 1024 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 ALG6Q9Y672 507 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 PIPSLA2A3N6 862 aa23.38■■□□□ 1.33
LSM4-202ENST00000593564 HACD1B0YJ81 288 aa23.38■■□□□ 1.33
LSM4-202ENST00000593564 RFPL1O75677 317 aa23.38■■□□□ 1.33
LSM4-202ENST00000593564 LONRF2Q1L5Z9 754 aa23.38■■□□□ 1.33
LSM4-202ENST00000593564 TMEM135Q86UB9 458 aa23.38■■□□□ 1.33
LSM4-202ENST00000593564 CNGA4Q8IV77 575 aa23.38■■□□□ 1.33
LSM4-202ENST00000593564 KATNAL2Q8IYT4 538 aa23.38■■□□□ 1.33
LSM4-202ENST00000593564 IMP3Q9NV31 184 aaKnown RBP23.38■■□□□ 1.33
LSM4-202ENST00000593564 RSPH14Q9UHP6 348 aa23.38■■□□□ 1.33
LSM4-202ENST00000593564 SPENQ96T58 3664 aaKnown RBP23.37■■□□□ 1.33
LSM4-202ENST00000593564 CLEC18AA5D8T8 446 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 KLHL33A6NCF5 533 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 OR5K3A6NET4 321 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 TLCD2A6NGC4 264 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 K7EM74 188 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 STX7O15400 261 aaKnown RBP23.37■■□□□ 1.33
LSM4-202ENST00000593564 ZRANB2O95218 330 aaKnown RBP eCLIP23.37■■□□□ 1.33
LSM4-202ENST00000593564 EBLN1P0CF75 366 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 NR1D1P20393 614 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 MSH3P20585 1137 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 PBLDP30039 288 aaPredicted RBP23.37■■□□□ 1.33
LSM4-202ENST00000593564 DNTTIP2Q5QJE6 756 aaKnown RBP23.37■■□□□ 1.33
LSM4-202ENST00000593564 CLEC18BQ6UXF7 455 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 APLFQ8IW19 511 aaPredicted RBP23.37■■□□□ 1.33
LSM4-202ENST00000593564 RCOR2Q8IZ40 523 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 CLEC18CQ8NCF0 446 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 ZNF398Q8TD17 642 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 ZFPM2Q8WW38 1151 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 SEC14L1Q92503 715 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 HAUS1Q96CS2 278 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 FSD1LQ9BXM9 530 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 ACTL8Q9H568 366 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 FGF21Q9NSA1 209 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 MAN2B2Q9Y2E5 1009 aa23.37■■□□□ 1.33
LSM4-202ENST00000593564 CFAP20Q9Y6A4 193 aaKnown RBP23.37■■□□□ 1.33
LSM4-202ENST00000593564 MGAT4DA6NG13 374 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 PRAMEF1O95521 474 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 PTMSP20962 102 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 AKT1P31749 480 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 ARL4DP49703 201 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 HSD11B2P80365 405 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 XRCC4Q13426 336 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 FNBP1LQ5T0N5 605 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 D2HGDHQ8N465 521 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 BEND7Q8N7W2 519 aaPredicted RBP23.36■■□□□ 1.33
LSM4-202ENST00000593564 TEX19Q8NA77 164 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 OR2L2Q8NH16 312 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 INSM2Q96T92 566 aaPredicted RBP23.36■■□□□ 1.33
LSM4-202ENST00000593564 GPR87Q9BY21 358 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 GOLPH3Q9H4A6 298 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 HRASLS2Q9NWW9 162 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 TLK1Q9UKI8 766 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 ACSL5Q9ULC5 683 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 PLAAQ9Y263 795 aa23.36■■□□□ 1.33
LSM4-202ENST00000593564 UBA6A0AVT1 1052 aaPredicted RBP23.35■■□□□ 1.33
LSM4-202ENST00000593564 NTRK1P04629 796 aa23.35■■□□□ 1.33
LSM4-202ENST00000593564 PTPRCAPQ14761 206 aa23.35■■□□□ 1.33
LSM4-202ENST00000593564 CERS6Q6ZMG9 384 aa23.35■■□□□ 1.33
LSM4-202ENST00000593564 ASB18Q6ZVZ8 466 aa23.35■■□□□ 1.33
LSM4-202ENST00000593564 DET1Q7L5Y6 550 aa23.35■■□□□ 1.33
LSM4-202ENST00000593564 OOSP2Q86WS3 158 aa23.35■■□□□ 1.33
LSM4-202ENST00000593564 MIB2Q96AX9 1013 aa23.35■■□□□ 1.33
LSM4-202ENST00000593564 RBM41Q96IZ5 413 aaKnown RBP23.35■■□□□ 1.33
LSM4-202ENST00000593564 C12orf66Q96MD2 445 aa23.35■■□□□ 1.33
LSM4-202ENST00000593564 WWP1Q9H0M0 922 aa23.35■■□□□ 1.33
LSM4-202ENST00000593564 GBA3Q9H227 469 aa23.35■■□□□ 1.33
LSM4-202ENST00000593564 ARL5AQ9Y689 179 aa23.35■■□□□ 1.33
LSM4-202ENST00000593564 AKR1B15C9JRZ8 316 aaPredicted RBP23.34■■□□□ 1.33
LSM4-202ENST00000593564 AGTP01019 485 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 LPOP22079 712 aaPredicted RBP23.34■■□□□ 1.33
LSM4-202ENST00000593564 CD97P48960 835 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 MARCKSL1P49006 195 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 GEMP55040 296 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 TUBB4BP68371 445 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 SEMA5AQ13591 1074 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 TUBB2AQ13885 445 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 TAF1AQ15573 450 aaPredicted RBP23.34■■□□□ 1.33
LSM4-202ENST00000593564 BCL7AQ4VC05 210 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 DUS1LQ6P1R4 473 aaKnown RBP23.34■■□□□ 1.33
LSM4-202ENST00000593564 BBS12Q6ZW61 710 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 CCDC50Q8IVM0 306 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 CARFQ8N187 725 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 RUFY1Q96T51 708 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 GORASP1Q9BQQ3 440 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 TUBB2BQ9BVA1 445 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 FICDQ9BVA6 458 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 KIR3DX1Q9H7L2 352 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms