RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ZNF548Q8NEK5 533 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-220ENST00000593008 OR56A4Q8NGH8 313 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 LMX1AQ8TE12 382 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 ADAMTS14Q8WXS8 1223 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 ULK4Q96C45 1275 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 DHRS4Q9BTZ2 278 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 LRRC61Q9BV99 259 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 CDH19Q9H159 772 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 TRIM39Q9HCM9 518 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 KLQ9UEF7 1012 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 RUVBL2Q9Y230 463 aaKnown RBP9.49□□□□□ -0.89
DDX39A-220ENST00000593008 KCNK6Q9Y257 313 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 PLAAQ9Y263 795 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 DNAJC16Q9Y2G8 782 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 NFS1Q9Y697 457 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 ASPMQ8IZT6 3477 aa9.49□□□□□ -0.89
DDX39A-220ENST00000593008 FAM95CA0A1B0GW59 222 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 FAM149AA5PLN7 773 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 KRT87PA6NCN2 255 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 H3BM21 787 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 PHGDHO43175 533 aaKnown RBP9.48□□□□□ -0.89
DDX39A-220ENST00000593008 NUAK1O60285 661 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 SPAG6O75602 509 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 SASH3O75995 380 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 CDK14O94921 469 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 RASGRP1O95267 797 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 TRIM16O95361 564 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 GSTA2P09210 222 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 GIMD1P0DJR0 217 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 MCM3P25205 808 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 PHBP35232 272 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 TAS2R39P59534 338 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 SRP54P61011 504 aaKnown RBP9.48□□□□□ -0.89
DDX39A-220ENST00000593008 HNRNPKP61978 463 aaKnown RBP eCLIP9.48□□□□□ -0.89
DDX39A-220ENST00000593008 YPEL5P62699 121 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 PPARDQ03181 441 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 ZNF844Q08AG5 666 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 ITIH4Q14624 930 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 TMED2Q15363 201 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 SEPT7Q16181 437 aaKnown RBP9.48□□□□□ -0.89
DDX39A-220ENST00000593008 DEFB133Q30KQ1 61 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 PROX2Q3B8N5 592 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 ZNF658BQ4V348 819 aaPredicted RBP9.48□□□□□ -0.89
DDX39A-220ENST00000593008 PRRT3Q5FWE3 981 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 LDLRAP1Q5SW96 308 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 ARMC3Q5W041 872 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 CEP128Q6ZU80 1094 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 NRROSQ86YC3 692 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 VRK3Q8IV63 474 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 CEP97Q8IW35 865 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 PHACTR4Q8IZ21 702 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 DTX3LQ8TDB6 740 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 SLC44A1Q8WWI5 657 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.48□□□□□ -0.89
DDX39A-220ENST00000593008 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.48□□□□□ -0.89
DDX39A-220ENST00000593008 DCUN1D1Q96GG9 259 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 SGSM3Q96HU1 749 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 VPS39Q96JC1 886 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 ZIM3Q96PE6 472 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 CYTH2Q99418 400 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 RBBP8Q99708 897 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 NRTNQ99748 197 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 C19orf43Q9BQ61 176 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 AARSD1Q9BTE6 412 aaKnown RBP9.48□□□□□ -0.89
DDX39A-220ENST00000593008 TSPYL1Q9H0U9 437 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 TMEM168Q9H0V1 697 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 SARS2Q9NP81 518 aaKnown RBP9.48□□□□□ -0.89
DDX39A-220ENST00000593008 APOBEC3BQ9UH17 382 aaKnown RBP9.48□□□□□ -0.89
DDX39A-220ENST00000593008 TBK1Q9UHD2 729 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 IKZF3Q9UKT9 509 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 GPSM3Q9Y4H4 160 aa9.48□□□□□ -0.89
DDX39A-220ENST00000593008 CACNA1BQ00975 2339 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 PRAMEF33A0A0G2JMD5 474 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 NEMP2A6NFY4 417 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 PRMT5O14744 637 aaPredicted RBP9.47□□□□□ -0.89
DDX39A-220ENST00000593008 CHUKO15111 745 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 AQP9O43315 295 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 GRID2O43424 1007 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 POP7O75817 140 aaKnown RBP9.47□□□□□ -0.89
DDX39A-220ENST00000593008 NUDT17P0C025 328 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 ATP1B2P14415 290 aaPredicted RBP9.47□□□□□ -0.89
DDX39A-220ENST00000593008 PKMP14618 531 aaKnown RBP9.47□□□□□ -0.89
DDX39A-220ENST00000593008 CKMT2P17540 419 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 HTR1BP28222 390 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 CCR7P32248 378 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 GP5P40197 560 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 NSG1P42857 185 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 TTPAP49638 278 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 PRLHRP49683 370 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 ACADVLP49748 655 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 LIMK2P53671 638 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 DAB2P98082 770 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 IRF9Q00978 393 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 BOP1Q14137 746 aaKnown RBP9.47□□□□□ -0.89
DDX39A-220ENST00000593008 NFE2L1Q14494 772 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 CASP8Q14790 479 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 KLHL38Q2WGJ6 581 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 PYCR3Q53H96 274 aa9.47□□□□□ -0.89
DDX39A-220ENST00000593008 AARS2Q5JTZ9 985 aaKnown RBP9.47□□□□□ -0.89
DDX39A-220ENST00000593008 MROH9Q5TGP6 573 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms