RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 KCNJ13O60928 360 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 SERPINC1P01008 464 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 CAPN1P07384 714 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 MTHFD1P11586 935 aaKnown RBP17.84■□□□□ 0.45
CIRBP-238ENST00000592412 GTF2H3Q13889 308 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 PDK1Q15118 436 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 CHRNA6Q15825 494 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 EIF2S3LQ2VIR3 472 aaKnown RBP17.84■□□□□ 0.45
CIRBP-238ENST00000592412 TEX44Q53QW1 395 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 JMJD6Q6NYC1 403 aaPredicted RBP17.84■□□□□ 0.45
CIRBP-238ENST00000592412 KLHL35Q6PF15 583 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 KDELC1Q6UW63 502 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 DDHD1Q8NEL9 900 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 DTX3LQ8TDB6 740 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 BRSK1Q8TDC3 778 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 NAT14Q8WUY8 206 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 MR1Q95460 341 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 INSM2Q96T92 566 aaPredicted RBP17.84■□□□□ 0.45
CIRBP-238ENST00000592412 CD180Q99467 661 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 NUDT9Q9BW91 350 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 XPO4Q9C0E2 1151 aaKnown RBP17.84■□□□□ 0.45
CIRBP-238ENST00000592412 KCND1Q9NSA2 647 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 IMP3Q9NV31 184 aaKnown RBP17.84■□□□□ 0.45
CIRBP-238ENST00000592412 CUEDC1Q9NWM3 386 aaPredicted RBP17.84■□□□□ 0.45
CIRBP-238ENST00000592412 HRASLS2Q9NWW9 162 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 IL17CQ9P0M4 197 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 SPTBP11277 2137 aa17.84■□□□□ 0.45
CIRBP-238ENST00000592412 LOC285095A0A1B0GVY8 99 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 OR2AG2A6NM03 316 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 APOL1O14791 398 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 DDX3YO15523 660 aaKnown RBP17.83■□□□□ 0.44
CIRBP-238ENST00000592412 GYPCP04921 128 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 PTPN3P26045 913 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 RORAP35398 523 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 CHRNA4P43681 627 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 KPNA2P52292 529 aaKnown RBP17.83■□□□□ 0.44
CIRBP-238ENST00000592412 ITGA1P56199 1179 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 ABRQ12979 859 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 PLCL1Q15111 1095 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 PLEKHS1Q5SXH7 462 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 ZFYVE27Q5T4F4 411 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 GPRC6AQ5T6X5 926 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 METRNLQ641Q3 311 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 TMEM220Q6QAJ8 160 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 FAM151BQ6UXP7 276 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 TMEM126BQ8IUX1 230 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 BEND7Q8N7W2 519 aaPredicted RBP17.83■□□□□ 0.44
CIRBP-238ENST00000592412 RBMXL3Q8N7X1 1067 aaKnown RBP17.83■□□□□ 0.44
CIRBP-238ENST00000592412 ENDOVQ8N8Q3 282 aaKnown RBP17.83■□□□□ 0.44
CIRBP-238ENST00000592412 FDCSPQ8NFU4 85 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 SPDYE1Q8NFV5 336 aaPredicted RBP17.83■□□□□ 0.44
CIRBP-238ENST00000592412 TEKT5Q96M29 485 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 GBP4Q96PP9 640 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 BTRCQ9Y297 605 aa17.83■□□□□ 0.44
CIRBP-238ENST00000592412 A0A0A6YYK5 440 aaPredicted RBP17.82■□□□□ 0.44
CIRBP-238ENST00000592412 UBA6A0AVT1 1052 aaPredicted RBP17.82■□□□□ 0.44
CIRBP-238ENST00000592412 BUD23O43709 281 aaKnown RBP17.82■□□□□ 0.44
CIRBP-238ENST00000592412 LCA5LO95447 670 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 ZBTB11O95625 1053 aaPredicted RBP17.82■□□□□ 0.44
CIRBP-238ENST00000592412 MBD3O95983 291 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 COL8A1P27658 744 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 SPAM1P38567 509 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 ARCN1P48444 511 aaKnown RBP17.82■□□□□ 0.44
CIRBP-238ENST00000592412 ARL4DP49703 201 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 WASHC5Q12768 1159 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 ZNF789Q5FWF6 425 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 SIRPB2Q5JXA9 342 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 LDLRAP1Q5SW96 308 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 SLC6A19Q695T7 634 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 FAM198BQ6UWH4 519 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 VSIG1Q86XK7 387 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 RHOT1Q8IXI2 618 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 DSELQ8IZU8 1212 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 TTC25Q96NG3 672 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 LRFN5Q96NI6 719 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 SRPK1Q96SB4 655 aaKnown RBP17.82■□□□□ 0.44
CIRBP-238ENST00000592412 MFRPQ9BY79 579 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 WWP1Q9H0M0 922 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 LATS2Q9NRM7 1088 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 SLC24A2Q9UI40 661 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 TCFL5Q9UL49 500 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 ZNF451Q9Y4E5 1061 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 PCDHGB7Q9Y5F8 929 aa17.82■□□□□ 0.44
CIRBP-238ENST00000592412 DNMT3AQ9Y6K1 912 aaPredicted RBP17.82■□□□□ 0.44
CIRBP-238ENST00000592412 CACNA1DQ01668 2161 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 OR6C74A6NCV1 312 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 MEN1O00255 615 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 PPP1R12AO14974 1030 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-238ENST00000592412 TMEM63AO94886 807 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 RAB40ALP0C0E4 278 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 H2AFZP0C0S5 128 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 PBLDP30039 288 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-238ENST00000592412 WNT3AP56704 352 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 FANCCQ00597 558 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 PDE1BQ01064 536 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 MESDQ14696 234 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 PRKD1Q15139 912 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-238ENST00000592412 ZNF787Q6DD87 383 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 H2AFVQ71UI9 128 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 OOSP2Q86WS3 158 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms