RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SMPD3Q9NY59 655 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 ABI3Q9P2A4 366 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 ZNF222Q9UK12 451 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 GMEB2Q9UKD1 530 aa13.17□□□□□ -0.3
SMARCA4-216ENST00000591545 ENPP3O14638 875 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 MPZL2O60487 215 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 ALAS2P22557 587 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 MED22Q15528 200 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 CFAP206Q8IYR0 622 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 PLD5Q8N7P1 536 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 TFAP2BQ92481 460 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 LMAN2LQ9H0V9 348 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 ERVK-5Q9HDB9 667 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 DNAJC11Q9NVH1 559 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 DMAC2Q9NW81 257 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 MRPS7Q9Y2R9 242 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 DUOX1Q9NRD9 1551 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 CLDN4O14493 209 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 KHDRBS3O75525 346 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 S100A1P23297 94 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 MPSTP25325 297 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 RPS6KA3P51812 740 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 CWF19L1Q69YN2 538 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 TXNDC8Q6A555 127 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 KLHL24Q6TFL4 600 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 PDCD10Q9BUL8 212 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 LOC110117498-PIK3R3F6TDL0 507 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 TRMUO75648 421 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 RPL4P36578 427 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 CSKP41240 450 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 POLR2JP52435 117 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 ACTR3P61158 418 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 GHRHRQ02643 423 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 SUZ12Q15022 739 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 DDI2Q5TDH0 399 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 GLYATQ6IB77 296 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 CLEC20AQ6ZU45 233 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 CRYBG2Q8N1P7 616 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 OR4A15Q8NGL6 344 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 IGSF21Q96ID5 467 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 ZNF514Q96K75 400 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 APOBEC3GQ9HC16 384 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 GKN1Q9NS71 199 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 SEMA3GQ9NS98 782 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 NUDT4Q9NZJ9 180 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 SUCOQ9UBS9 1254 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 EGFL7Q9UHF1 273 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 C2CD4BA6NLJ0 364 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 SIN3BO75182 1162 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 TIPRLO75663 272 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 SCELO95171 688 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 LYNP07948 512 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 LIMK2P53671 638 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 CPTPQ5TA50 214 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 RNASEH2BQ5TBB1 312 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 HECTD2Q5U5R9 776 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 DRICH1Q6PGQ1 229 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 GJD3Q8N144 294 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 C8orf48Q96LL4 319 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 NOL11Q9H8H0 719 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 EXD2Q9NVH0 621 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 STOML2Q9UJZ1 356 aa13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 GNEQ9Y223 722 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-216ENST00000591545 ATP6AP2A0A1C7CYW4 349 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 ATP6AP2O75787 350 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 ASPAP45381 313 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 SLC1A5Q15758 541 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 TYSND1Q2T9J0 566 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 LDLRAP1Q5SW96 308 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 MAMDC4Q6UXC1 1216 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 TMPRSS11AQ6ZMR5 421 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 GK5Q6ZS86 529 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 SVOPLQ8N434 492 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 TRPV1Q8NER1 839 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 CNPPD1Q9BV87 410 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 PRRG4Q9BZD6 226 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 ABCG8Q9H221 673 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 OGDHLQ9ULD0 1010 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 OR2AG2A6NM03 316 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 THRBP10828 461 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 SDC2P34741 201 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 JAG1P78504 1218 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 LPCAT4Q643R3 524 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 ZNF776Q68DI1 518 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 PLET1Q6UQ28 207 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 RPTNQ6XPR3 784 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 CHST15Q7LFX5 561 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 LRRC57Q8N9N7 239 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 CPT1BQ92523 772 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 PSMG2Q969U7 264 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 CENPNQ96H22 339 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 FBXL18Q96ME1 805 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 BTBD1Q9H0C5 482 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 CD84Q9UIB8 345 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 BCKDKO14874 412 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 UGT2B17O75795 530 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 LDOC1O95751 146 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 GJA1P17302 382 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 PTX3P26022 381 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 CDH5P33151 784 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms