RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 PSMD13Q9UNM6 376 aa19.81■□□□□ 0.76
DDX39A-207ENST00000588542 MSRB2Q9Y3D2 182 aa19.81■□□□□ 0.76
DDX39A-207ENST00000588542 FAM169AQ9Y6X4 670 aa19.81■□□□□ 0.76
DDX39A-207ENST00000588542 OR52A4PA6NMU1 304 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 RPLP0P05388 317 aaKnown RBP19.8■□□□□ 0.76
DDX39A-207ENST00000588542 POLBP06746 335 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 PGAM1P18669 254 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 PPARGP37231 505 aaPredicted RBP19.8■□□□□ 0.76
DDX39A-207ENST00000588542 GPR3P46089 330 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 CBLBQ13191 982 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 HIF1AQ16665 826 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 TYSND1Q2T9J0 566 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 MRNIPQ6NTE8 343 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 NEPROQ6NW34 567 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 SLC9B2Q86UD5 537 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 ZNF761Q86XN6 746 aaPredicted RBP19.8■□□□□ 0.76
DDX39A-207ENST00000588542 CFAP206Q8IYR0 622 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 BBOF1Q8ND07 529 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 WDR48Q8TAF3 677 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 LRRC1Q9BTT6 524 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 P2RY12Q9H244 342 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 COG4Q9H9E3 785 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 ACSL5Q9ULC5 683 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 CLCA2Q9UQC9 943 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 TEX264Q9Y6I9 313 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 CHD8Q9HCK8 2581 aa19.8■□□□□ 0.76
DDX39A-207ENST00000588542 PRAMEF33A0A0G2JMD5 474 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 QSOX1O00391 747 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 TCEA3O75764 348 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 GSTM1P09488 218 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 OR56A5P0C7T3 313 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 JUPP14923 745 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 ALDH4A1P30038 563 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 ELK3P41970 407 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 ARL4CP56559 192 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 GSTM4Q03013 218 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 TARDBPQ13148 414 aaKnown RBP eCLIP19.79■□□□□ 0.76
DDX39A-207ENST00000588542 CAMK2BQ13554 666 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 CRYMQ14894 314 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 TRADDQ15628 312 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 RPE65Q16518 533 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 LONRF1Q17RB8 773 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 HP1BP3Q5SSJ5 553 aaPredicted RBP19.79■□□□□ 0.76
DDX39A-207ENST00000588542 CENPUQ71F23 418 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 UNC5BQ8IZJ1 945 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 NAT9Q9BTE0 207 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 WWP1Q9H0M0 922 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 VPS37BQ9H9H4 285 aa19.79■□□□□ 0.76
DDX39A-207ENST00000588542 UTP11Q9Y3A2 253 aaKnown RBP19.79■□□□□ 0.76
DDX39A-207ENST00000588542 IGHV1OR21-1A0A087WYE8 117 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 E7ESA3 106 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 PRMT5O14744 637 aaPredicted RBP19.78■□□□□ 0.76
DDX39A-207ENST00000588542 NDC80O14777 642 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 NDUFS3O75489 264 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 FTH1P02794 183 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 OGNP20774 298 aaKnown RBP19.78■□□□□ 0.76
DDX39A-207ENST00000588542 HALP42357 657 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 PDX1P52945 283 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 SLC7A5Q01650 507 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 BIRC2Q13490 618 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 CAPRIN2Q6IMN6 1127 aaKnown RBP19.78■□□□□ 0.76
DDX39A-207ENST00000588542 TMPRSS9Q7Z410 1059 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 SDCCAG8Q86SQ7 713 aaPredicted RBP19.78■□□□□ 0.76
DDX39A-207ENST00000588542 CILP2Q8IUL8 1156 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 MMGT1Q8N4V1 131 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 OTUD6BQ8N6M0 293 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.78■□□□□ 0.76
DDX39A-207ENST00000588542 NOA1Q8NC60 698 aaKnown RBP19.78■□□□□ 0.76
DDX39A-207ENST00000588542 SPDYE1Q8NFV5 336 aaPredicted RBP19.78■□□□□ 0.76
DDX39A-207ENST00000588542 LKAAEAR1Q8TD35 194 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 LPGAT1Q92604 370 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 LRRC39Q96DD0 335 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 RMDN2Q96LZ7 410 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 GFM1Q96RP9 751 aaKnown RBP19.78■□□□□ 0.76
DDX39A-207ENST00000588542 INSM2Q96T92 566 aaPredicted RBP19.78■□□□□ 0.76
DDX39A-207ENST00000588542 TCF12Q99081 682 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 RAB17Q9H0T7 212 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 OR52A5Q9H2C5 316 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 C20orf96Q9NUD7 363 aaPredicted RBP19.78■□□□□ 0.76
DDX39A-207ENST00000588542 ATXN7L1Q9ULK2 861 aaPredicted RBP19.78■□□□□ 0.76
DDX39A-207ENST00000588542 CHMP2BQ9UQN3 213 aa19.78■□□□□ 0.76
DDX39A-207ENST00000588542 IQCF5A8MTL0 148 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 D6RAR5 112 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 TTC4O95801 387 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 VIPP01282 170 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 RPS3P23396 243 aaKnown RBP eCLIP19.77■□□□□ 0.76
DDX39A-207ENST00000588542 CD1CP29017 333 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 PDHA2P29803 388 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 CALCOCO2Q13137 446 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 SPIDRQ14159 915 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 FASTKD3Q14CZ7 662 aaKnown RBP19.77■□□□□ 0.76
DDX39A-207ENST00000588542 ZNF789Q5FWF6 425 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 SPANXN3Q5MJ09 141 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 C8orf74Q6P047 294 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 RBM44Q6ZP01 1051 aaKnown RBP19.77■□□□□ 0.76
DDX39A-207ENST00000588542 DENND6AQ8IWF6 608 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 AVL9Q8NBF6 648 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 ART4Q93070 314 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 SH3KBP1Q96B97 665 aa19.77■□□□□ 0.76
DDX39A-207ENST00000588542 BIRC8Q96P09 236 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms