RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 CCDC3Q9BQI4 270 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 TRIM56Q9BRZ2 755 aaKnown RBP11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 TSPYL1Q9H0U9 437 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 SAYSD1Q9NPB0 183 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 WASH6PQ9NQA3 447 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 PRDM8Q9NQV8 689 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 POT1Q9NUX5 634 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 TOR4AQ9NXH8 423 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 IL1RAPL1Q9NZN1 696 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 LRIT1Q9P2V4 623 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 SLC23A2Q9UGH3 650 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 ST14Q9Y5Y6 855 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 TEX264Q9Y6I9 313 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 FAM169AQ9Y6X4 670 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 LY6G6EA0A0G2JKS1 128 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 E7ESA3 106 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 KPNA5O15131 536 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 OR1I1O60431 355 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 ESR1P03372 595 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 APOA4P06727 396 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 PNLIPP16233 465 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 RPS3P23396 243 aaKnown RBP eCLIP11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 SLC1A2P43004 574 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 GPR3P46089 330 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 FASLGP48023 281 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 RPA4Q13156 261 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 SPIDRQ14159 915 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 KRT33BQ14525 404 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 SEMA3AQ14563 771 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 MAP9Q49MG5 647 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 HSP90AA5PQ58FG0 334 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 N4BP2L1Q5TBK1 243 aaPredicted RBP11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 IYDQ6PHW0 289 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 DHRS13Q6UX07 377 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 UNC5AQ6ZN44 842 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 LDB1Q86U70 411 aaPredicted RBP11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 PALM2Q8IXS6 379 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 RBM12BQ8IXT5 1001 aaKnown RBP11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 CFAP206Q8IYR0 622 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 AGGF1Q8N302 714 aaeCLIP11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 ARL14Q8N4G2 192 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 PNPLA1Q8N8W4 532 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 NAT14Q8WUY8 206 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 PATE1Q8WXA2 126 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 ADAMTS14Q8WXS8 1223 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 CDKL2Q92772 493 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 TMEM159Q96B96 161 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 CCDC97Q96F63 343 aaPredicted RBP11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 AHCYL2Q96HN2 611 aaKnown RBP11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 PWWP2AQ96N64 755 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 FCRL3Q96P31 734 aaPredicted RBP11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 COG4Q9H9E3 785 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 EPB41L5Q9HCM4 733 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 SARS2Q9NP81 518 aaKnown RBP11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 IARS2Q9NSE4 1012 aaKnown RBP11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 IMP3Q9NV31 184 aaKnown RBP11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 ZFATQ9P243 1243 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 CPNE7Q9UBL6 633 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 PSMD13Q9UNM6 376 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 HEBP2Q9Y5Z4 205 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 RNF215Q9Y6U7 377 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 U3KQA8 63 aa11.65□□□□□ -0.54
SDHDP1-201ENST00000588055 CNOT1A5YKK6 2376 aaKnown RBP11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 GOLGA4Q13439 2230 aaKnown RBP11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 ARID1BQ8NFD5 2236 aaPredicted RBP11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 TRBV23OR9-2A0A075B6M9 112 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 A6NCN8 305 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 PCNX2A6NKB5 2137 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 DUX1O43812 170 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 TCEA3O75764 348 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 RPLP0P05388 317 aaKnown RBP11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 ADRB1P08588 477 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 DEKP35659 375 aaKnown RBP11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 ADARP55265 1226 aaKnown RBP11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 CUL1Q13616 776 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 PLCL1Q15111 1095 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 PERM1Q5SV97 790 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 HES3Q5TGS1 186 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 METRNLQ641Q3 311 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 STEAP4Q687X5 459 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 ABRAXAS1Q6UWZ7 409 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 CAPN12Q6ZSI9 719 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 KIAA0408Q6ZU52 694 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 MICALCLQ6ZW33 695 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 OTOAQ7RTW8 1153 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 SPRED1Q7Z699 444 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 SLCO6A1Q86UG4 719 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 Q8N9G6 341 aaPredicted RBP11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 OR10G6Q8NH81 332 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 ASZ1Q8WWH4 475 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 IFT81Q8WYA0 676 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 LPGAT1Q92604 370 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 C12orf66Q96MD2 445 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 DEPDC7Q96QD5 511 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 GFM1Q96RP9 751 aaKnown RBP11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 FMO2Q99518 471 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 WWP1Q9H0M0 922 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 L2HGDHQ9H9P8 463 aa11.64□□□□□ -0.55
SDHDP1-201ENST00000588055 NSMCE4AQ9NXX6 385 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms