RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 NAV3Q8IVL0 2385 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 A0A0A6YYK5 440 aaPredicted RBP8.38□□□□□ -1.07
SDF2-204ENST00000587338 C1orf232A0A0U1RR37 186 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 CTAGE9A4FU28 777 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 BTNL10A8MVZ5 291 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 PRSS44E7EML9 344 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 LRRTM2O43300 516 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 FZD6O60353 706 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 MAFKO60675 156 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 ZG16O60844 167 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 URI1O94763 535 aaPredicted RBP8.38□□□□□ -1.07
SDF2-204ENST00000587338 CYP1A2P05177 515 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 KLK3P07288 261 aaPredicted RBP8.38□□□□□ -1.07
SDF2-204ENST00000587338 BRAFP15056 766 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 CLCNKAP51800 687 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 DRG2P55039 364 aaKnown RBP8.38□□□□□ -1.07
SDF2-204ENST00000587338 RRADP55042 308 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 ATP1A4Q13733 1029 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 MESDQ14696 234 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 ZRSR2Q15696 482 aaKnown RBP8.38□□□□□ -1.07
SDF2-204ENST00000587338 GPR19Q15760 415 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 ZXDCQ2QGD7 858 aaPredicted RBP8.38□□□□□ -1.07
SDF2-204ENST00000587338 PPP1R15BQ5SWA1 713 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 HENMT1Q5T8I9 393 aaKnown RBP8.38□□□□□ -1.07
SDF2-204ENST00000587338 LYPLAL1Q5VWZ2 237 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 SP5Q6BEB4 398 aaPredicted RBP8.38□□□□□ -1.07
SDF2-204ENST00000587338 TMCO3Q6UWJ1 677 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 DAAM2Q86T65 1068 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 BPHLQ86WA6 291 aaPredicted RBP8.38□□□□□ -1.07
SDF2-204ENST00000587338 SYCE1Q8N0S2 351 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 ARFGAP1Q8N6T3 406 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 GLIS1Q8NBF1 620 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 LPCAT1Q8NF37 534 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 TRIM58Q8NG06 486 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 UBE2Q2Q8WVN8 375 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 SGSM3Q96HU1 749 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 WDR24Q96S15 920 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 FAM83DQ9H4H8 585 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 RUBCNLQ9H714 662 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 ZWILCHQ9H900 591 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 MRPL47Q9HD33 250 aaKnown RBP8.38□□□□□ -1.07
SDF2-204ENST00000587338 SLC40A1Q9NP59 571 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 PARVAQ9NVD7 372 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 CWC15Q9P013 229 aaKnown RBP8.38□□□□□ -1.07
SDF2-204ENST00000587338 EPHA6Q9UF33 1036 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 SLC23A2Q9UGH3 650 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 ANAPC7Q9UJX3 599 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 ITGB1BP2Q9UKP3 347 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 TCFL5Q9UL49 500 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 DNPEPQ9ULA0 475 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 CHKBQ9Y259 395 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 TTLL3Q9Y4R7 772 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 CAPN6Q9Y6Q1 641 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 SCINQ9Y6U3 715 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 PKDREJQ9NTG1 2253 aa8.38□□□□□ -1.07
SDF2-204ENST00000587338 H3BRJ5 948 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 PRPSAP2O60256 369 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 SLC25A14O95258 325 aaPredicted RBP8.37□□□□□ -1.07
SDF2-204ENST00000587338 FTCDO95954 541 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 ALPPP05187 535 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 ZNF7P17097 686 aaPredicted RBP8.37□□□□□ -1.07
SDF2-204ENST00000587338 SSR1P43307 286 aaKnown RBP8.37□□□□□ -1.07
SDF2-204ENST00000587338 GLRBP48167 497 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 SPINT3P49223 89 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 CDH6P55285 790 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 TUBB4BP68371 445 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 DSC2Q02487 901 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 TUBB2AQ13885 445 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 ALS2CLQ60I27 953 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 LCN10Q6JVE6 187 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 ADGRG6Q86SQ4 1221 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 RBM12BQ8IXT5 1001 aaKnown RBP8.37□□□□□ -1.07
SDF2-204ENST00000587338 ZBTB2Q8N680 514 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 SLC38A9Q8NBW4 561 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 ST6GALNAC3Q8NDV1 305 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 INPP5DQ92835 1189 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 BTBD6Q96KE9 485 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 NAPGQ99747 312 aaPredicted RBP8.37□□□□□ -1.07
SDF2-204ENST00000587338 MAP3K3Q99759 626 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 TUBB2BQ9BVA1 445 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 SPATA16Q9BXB7 569 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 TDRD1Q9BXT4 1180 aaKnown RBP8.37□□□□□ -1.07
SDF2-204ENST00000587338 POLR1EQ9GZS1 481 aaKnown RBP8.37□□□□□ -1.07
SDF2-204ENST00000587338 GOLPH3Q9H4A6 298 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 ETNK2Q9NVF9 386 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 PKD2L2Q9NZM6 624 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 C5AR2Q9P296 337 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 UVRAGQ9P2Y5 699 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 OSGIN2Q9Y236 505 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 NTNG1Q9Y2I2 539 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 PCNX1Q96RV3 2341 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 SPG11Q96JI7 2443 aa8.37□□□□□ -1.07
SDF2-204ENST00000587338 UBA6A0AVT1 1052 aaPredicted RBP8.36□□□□□ -1.07
SDF2-204ENST00000587338 GRID2IPA4D2P6 1211 aa8.36□□□□□ -1.07
SDF2-204ENST00000587338 TLCD2A6NGC4 264 aa8.36□□□□□ -1.07
SDF2-204ENST00000587338 MYO1FO00160 1098 aa8.36□□□□□ -1.07
SDF2-204ENST00000587338 MEN1O00255 615 aa8.36□□□□□ -1.07
SDF2-204ENST00000587338 KMOO15229 486 aa8.36□□□□□ -1.07
SDF2-204ENST00000587338 DDX3YO15523 660 aaKnown RBP8.36□□□□□ -1.07
SDF2-204ENST00000587338 MTX2O75431 263 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms