RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 UBXN4Q92575 508 aa13.7□□□□□ -0.22
ATG4D-206ENST00000586863 KRT35Q92764 455 aa13.7□□□□□ -0.22
ATG4D-206ENST00000586863 SLC41A2Q96JW4 573 aa13.7□□□□□ -0.22
ATG4D-206ENST00000586863 VAT1Q99536 393 aa13.7□□□□□ -0.22
ATG4D-206ENST00000586863 GORASP1Q9BQQ3 440 aa13.7□□□□□ -0.22
ATG4D-206ENST00000586863 C10orf88Q9H8K7 445 aa13.7□□□□□ -0.22
ATG4D-206ENST00000586863 IMP3Q9NV31 184 aaKnown RBP13.7□□□□□ -0.22
ATG4D-206ENST00000586863 SMOXQ9NWM0 555 aa13.7□□□□□ -0.22
ATG4D-206ENST00000586863 RSPH14Q9UHP6 348 aa13.7□□□□□ -0.22
ATG4D-206ENST00000586863 TFR2Q9UP52 801 aa13.7□□□□□ -0.22
ATG4D-206ENST00000586863 PKP3Q9Y446 797 aa13.7□□□□□ -0.22
ATG4D-206ENST00000586863 PCDHB3Q9Y5E6 796 aa13.7□□□□□ -0.22
ATG4D-206ENST00000586863 ARL5AQ9Y689 179 aa13.7□□□□□ -0.22
ATG4D-206ENST00000586863 CFAP20Q9Y6A4 193 aaKnown RBP13.7□□□□□ -0.22
ATG4D-206ENST00000586863 NOTCH2Q04721 2471 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 CDC14CA4D256 554 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 PRAMEF1O95521 474 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 EBLN1P0CF75 366 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 MTHFD1P11586 935 aaKnown RBP13.69□□□□□ -0.22
ATG4D-206ENST00000586863 AKT1P31749 480 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 HADHBP55084 474 aaKnown RBP13.69□□□□□ -0.22
ATG4D-206ENST00000586863 TBX2Q13207 712 aaPredicted RBP13.69□□□□□ -0.22
ATG4D-206ENST00000586863 OLIG2Q13516 323 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 ITGA9Q13797 1035 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 PLCL1Q15111 1095 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 FNBP1LQ5T0N5 605 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 PWWP2BQ6NUJ5 590 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 DET1Q7L5Y6 550 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 CCDC50Q8IVM0 306 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 SIDT2Q8NBJ9 832 aaKnown RBP13.69□□□□□ -0.22
ATG4D-206ENST00000586863 RUFY1Q96T51 708 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 MAP3K3Q99759 626 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 FICDQ9BVA6 458 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 FSD1LQ9BXM9 530 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 AKIRIN1Q9H9L7 192 aaPredicted RBP13.69□□□□□ -0.22
ATG4D-206ENST00000586863 LHX9Q9NQ69 397 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.69□□□□□ -0.22
ATG4D-206ENST00000586863 FAM8A1Q9UBU6 413 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 KCND3Q9UK17 655 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 RARRES3Q9UL19 164 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 POLHQ9Y253 713 aa13.69□□□□□ -0.22
ATG4D-206ENST00000586863 DNMT3AQ9Y6K1 912 aaPredicted RBP13.69□□□□□ -0.22
ATG4D-206ENST00000586863 OR5K3A6NET4 321 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 HACD1B0YJ81 288 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 AKR1B15C9JRZ8 316 aaPredicted RBP13.68□□□□□ -0.22
ATG4D-206ENST00000586863 STX7O15400 261 aaKnown RBP13.68□□□□□ -0.22
ATG4D-206ENST00000586863 CREG1O75629 220 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 ZRANB2O95218 330 aaKnown RBP eCLIP13.68□□□□□ -0.22
ATG4D-206ENST00000586863 AGTP01019 485 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 CCNYL3P0C7X3 344 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 MSH3P20585 1137 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 RBL1P28749 1068 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 MAGEA1P43355 309 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 SRSF1Q07955 248 aaKnown RBP eCLIP13.68□□□□□ -0.22
ATG4D-206ENST00000586863 XRCC4Q13426 336 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 LONRF2Q1L5Z9 754 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 DNTTIP2Q5QJE6 756 aaKnown RBP13.68□□□□□ -0.22
ATG4D-206ENST00000586863 METRNLQ641Q3 311 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 KLHL35Q6PF15 583 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 BBS12Q6ZW61 710 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 SPDYE1Q8NFV5 336 aaPredicted RBP13.68□□□□□ -0.22
ATG4D-206ENST00000586863 INSM2Q96T92 566 aaPredicted RBP13.68□□□□□ -0.22
ATG4D-206ENST00000586863 APOL2Q9BQE5 337 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 HEMGNQ9BXL5 484 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 TRIM5Q9C035 493 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 TWSG1Q9GZX9 223 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 WWP1Q9H0M0 922 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 GBA3Q9H227 469 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 PDE7BQ9NP56 450 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 FKBPLQ9UIM3 349 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 TRHDEQ9UKU6 1024 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 PADI1Q9ULC6 663 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 PCDHGA6Q9Y5G7 932 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 FER1L5A0AVI2 2057 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 HIVEP3Q5T1R4 2406 aa13.68□□□□□ -0.22
ATG4D-206ENST00000586863 SNRNP200O75643 2136 aaKnown RBP13.67□□□□□ -0.22
ATG4D-206ENST00000586863 PIPSLA2A3N6 862 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 TLCD2A6NGC4 264 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 SGTAO43765 313 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 MT-ND3P03897 115 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 NTRK1P04629 796 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 DEKP35659 375 aaKnown RBP13.67□□□□□ -0.22
ATG4D-206ENST00000586863 C11orf63Q6NUN7 778 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 CYB5D1Q6P9G0 228 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 RCOR2Q8IZ40 523 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 LILRA3Q8N6C8 439 aaPredicted RBP13.67□□□□□ -0.22
ATG4D-206ENST00000586863 TC2NQ8N9U0 490 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 OR4K2Q8NGD2 314 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 ZNF398Q8TD17 642 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 RBM41Q96IZ5 413 aaKnown RBP13.67□□□□□ -0.22
ATG4D-206ENST00000586863 ZNF514Q96K75 400 aaPredicted RBP13.67□□□□□ -0.22
ATG4D-206ENST00000586863 RMDN2Q96LZ7 410 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 C12orf66Q96MD2 445 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 PPM1MQ96MI6 270 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 ACTL8Q9H568 366 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 FGF21Q9NSA1 209 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 HRASLS2Q9NWW9 162 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 PLAAQ9Y263 795 aa13.67□□□□□ -0.22
ATG4D-206ENST00000586863 SHANK1Q9Y566 2161 aa13.66□□□□□ -0.22
ATG4D-206ENST00000586863 ESPL1Q14674 2120 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms