RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 C1orf232A0A0U1RR37 186 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 LILRA5A6NI73 299 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 KIR2DS3K7RE56 304 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 FURINP09958 794 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 RBL1P28749 1068 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 STIP1P31948 543 aaKnown RBP20.15■□□□□ 0.82
SRSF1-206ENST00000583741 SPINT3P49223 89 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 UBE2IP63279 158 aaKnown RBP20.15■□□□□ 0.82
SRSF1-206ENST00000583741 FOXM1Q08050 763 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 PPIDQ08752 370 aaKnown RBP20.15■□□□□ 0.82
SRSF1-206ENST00000583741 AP1B1Q10567 949 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 KIR2DS5Q14953 304 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 PRKD1Q15139 912 aaPredicted RBP20.15■□□□□ 0.82
SRSF1-206ENST00000583741 LRRN4Q8WUT4 740 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 LYSMD1Q96S90 227 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.15■□□□□ 0.82
SRSF1-206ENST00000583741 EPB41L1Q9H4G0 881 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 ARFGAP3Q9NP61 516 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 UTP11Q9Y3A2 253 aaKnown RBP20.15■□□□□ 0.82
SRSF1-206ENST00000583741 KCTD3Q9Y597 815 aa20.15■□□□□ 0.82
SRSF1-206ENST00000583741 KCNN4O15554 427 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 GRID2O43424 1007 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 NUAK1O60285 661 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 KRT14P02533 472 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 SLC2A4P14672 509 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 DLSTP36957 453 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 GDF10P55107 478 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 SH3BP2P78314 561 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 NIPAL4Q0D2K0 466 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 PTK6Q13882 451 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 KCTD19Q17RG1 926 aaPredicted RBP20.14■□□□□ 0.81
SRSF1-206ENST00000583741 PLXDC1Q8IUK5 500 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 LRRC49Q8IUZ0 686 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 RAVER1Q8IY67 606 aaKnown RBP20.14■□□□□ 0.81
SRSF1-206ENST00000583741 CCDC89Q8N998 374 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 FAM71DQ8N9W8 422 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 C9orf72Q96LT7 481 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 PLEKHG4BQ96PX9 1271 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 FERMT1Q9BQL6 677 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 FAM83DQ9H4H8 585 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 RMI1Q9H9A7 625 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 PCDH9Q9HC56 1237 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 RBM22Q9NW64 420 aaKnown RBP eCLIP20.14■□□□□ 0.81
SRSF1-206ENST00000583741 SCHIP1Q9P0W5 487 aaPredicted RBP20.14■□□□□ 0.81
SRSF1-206ENST00000583741 ATXN10Q9UBB4 475 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 CROTQ9UKG9 612 aa20.14■□□□□ 0.81
SRSF1-206ENST00000583741 ZNF189O75820 626 aaPredicted RBP20.13■□□□□ 0.81
SRSF1-206ENST00000583741 IFNB1P01574 187 aa20.13■□□□□ 0.81
SRSF1-206ENST00000583741 C9P02748 559 aa20.13■□□□□ 0.81
SRSF1-206ENST00000583741 HLA-DQB2P05538 268 aa20.13■□□□□ 0.81
SRSF1-206ENST00000583741 ZNF8P17098 575 aaPredicted RBP20.13■□□□□ 0.81
SRSF1-206ENST00000583741 CD97P48960 835 aa20.13■□□□□ 0.81
SRSF1-206ENST00000583741 MLLT10P55197 1068 aa20.13■□□□□ 0.81
SRSF1-206ENST00000583741 GUCY2DQ02846 1103 aa20.13■□□□□ 0.81
SRSF1-206ENST00000583741 ZNF648Q5T619 568 aaPredicted RBP20.13■□□□□ 0.81
SRSF1-206ENST00000583741 TMEM135Q86UB9 458 aa20.13■□□□□ 0.81
SRSF1-206ENST00000583741 PHYKPLQ8IUZ5 450 aa20.13■□□□□ 0.81
SRSF1-206ENST00000583741 GALNT6Q8NCL4 622 aa20.13■□□□□ 0.81
SRSF1-206ENST00000583741 ERP44Q9BS26 406 aa20.13■□□□□ 0.81
SRSF1-206ENST00000583741 NEU2Q9Y3R4 380 aa20.13■□□□□ 0.81
SRSF1-206ENST00000583741 SLC30A1Q9Y6M5 507 aa20.13■□□□□ 0.81
SRSF1-206ENST00000583741 BLACEA4D250 179 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 OR5K4A6NMS3 321 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 MATN3O15232 486 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 TYRP1P17643 537 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 RPL26P61254 145 aaKnown RBP20.12■□□□□ 0.81
SRSF1-206ENST00000583741 ERV3-1Q14264 604 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 TRIP13Q15645 432 aaPredicted RBP20.12■□□□□ 0.81
SRSF1-206ENST00000583741 C6orf15Q6UXA7 325 aaPredicted RBP20.12■□□□□ 0.81
SRSF1-206ENST00000583741 CCHCR1Q8TD31 782 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 TGM7Q96PF1 710 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 TSGA13Q96PP4 275 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 OR2AG1Q9H205 316 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 OSGEPL1Q9H4B0 414 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 KLC4Q9NSK0 619 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 ASIC3Q9UHC3 531 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 RPL26L1Q9UNX3 145 aaKnown RBP20.12■□□□□ 0.81
SRSF1-206ENST00000583741 MYO9AB2RTY4 2548 aa20.12■□□□□ 0.81
SRSF1-206ENST00000583741 TNRC6AQ8NDV7 1962 aaKnown RBP20.12■□□□□ 0.81
SRSF1-206ENST00000583741 ETS1P14921 441 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 CES1P23141 567 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 LEPRP48357 1165 aaKnown RBP20.11■□□□□ 0.81
SRSF1-206ENST00000583741 SEPHS1P49903 392 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 QPCTQ16769 361 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 TCTN3Q6NUS6 607 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 TMEM26Q6ZUK4 368 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 PRUNE1Q86TP1 453 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 CCDC13Q8IYE1 715 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 GLIS1Q8NBF1 620 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 EID2BQ96D98 161 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 ELMO2Q96JJ3 720 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 OR6C1Q96RD1 312 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 TRIM31Q9BZY9 425 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 UCK1Q9HA47 277 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 PKD2L2Q9NZM6 624 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 PCDHB3Q9Y5E6 796 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 MKRN2OSH3BPM6 223 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 STK10O94804 968 aaKnown RBP20.11■□□□□ 0.81
SRSF1-206ENST00000583741 KIAA0754O94854 1291 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 UBXN7O94888 489 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms