RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 C22orf31O95567 290 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 GOT2P00505 430 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 CD48P09326 243 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 PRPS2P11908 318 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 PTPN9P43378 593 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 RHBDL3P58872 404 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 SULT2A1Q06520 285 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 ZBED5Q49AG3 693 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 LINGO2Q7L985 606 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 ZNF558Q96NG5 402 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 CST11Q9H112 138 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 FZD10Q9ULW2 581 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 CNTN6Q9UQ52 1028 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 FAM234BA2RU67 622 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 MANSC4A6NHS7 340 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 PER2O15055 1255 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 CLDN11O75508 207 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 RSL1D1O76021 490 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 NDST3O95803 873 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 PRLP01236 227 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 AP1S2P56377 157 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 GBE1Q04446 702 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 SRSF11Q05519 484 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 TIGD6Q17RP2 521 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 FAM46CQ5VWP2 391 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 SIPA1Q96FS4 1042 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 ANKRA2Q9H9E1 313 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 GADD45GO95257 159 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 TSTD2Q5T7W7 516 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 TRIM74Q86UV6 250 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 TRIM73Q86UV7 250 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 PACRGLQ8N7B6 248 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 FAM156AQ8NDB6 213 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 OR8D1Q8WZ84 308 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 NSMCE3Q96MG7 304 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 IL1RAPQ9NPH3 570 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 SNTG1Q9NSN8 517 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 MED11Q9P086 117 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 GRIN2DO15399 1336 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 MSI1O43347 362 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 HSPA7P48741 367 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 PLEKHG6Q3KR16 790 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 CRTC2Q53ET0 693 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 GPALPP1Q8IXQ4 340 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 C8orf48Q96LL4 319 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 COMMD4Q9H0A8 199 aa14.37□□□□□ -0.11
CSNK1D-217ENST00000581241 SLIT3O75094 1523 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 OR4F21O95013 312 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 PDHA2P29803 388 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 ZNF155Q12901 538 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 USP41Q3LFD5 358 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 FAM91A1Q658Y4 838 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 TMEM214Q6NUQ4 689 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 ART5Q96L15 291 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 CORO1BQ9BR76 489 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 TBC1D17Q9HA65 648 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 STOX2Q9P2F5 926 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 NME6O75414 186 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 SERPINA3P01011 423 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 RHOQP17081 205 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 FOXN2P32314 431 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 GPD2P43304 727 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 NADK2Q4G0N4 442 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 EEF1DP3Q658K8 133 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 SIDT2Q8NBJ9 832 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 XAGE5Q8WWM1 108 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 DNASE1L2Q92874 299 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 PCDHGA3Q9Y5H0 932 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 RBM47A0AV96 593 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 TBX1O43435 398 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 TLR5O60602 858 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 PCDH1Q08174 1060 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 IKBKEQ14164 716 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 COLEC12Q5KU26 742 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 CFAP52Q8N1V2 620 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 GLB1L3Q8NCI6 653 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 GATA5Q9BWX5 397 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 EBPLQ9BY08 206 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 FAM124BQ9H5Z6 455 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 MARCH7Q9H992 704 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 FKBP7Q9Y680 259 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 MROH1Q8NDA8 1641 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 OR6C75A6NL08 312 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 MATN3O15232 486 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 CYP11A1P05108 521 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 CHRNB2P17787 502 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 TMEM44Q2T9K0 475 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 VSTM1Q6UX27 236 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 OR10G6Q8NH81 332 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 MRIQ9BWK5 157 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 SMURF2Q9HAU4 748 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 CALML5Q9NZT1 146 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 METTL21EPA6NDL7 271 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 KERAO60938 352 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 GATBO75879 557 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 IL1BP01584 269 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 ZCCHC12Q6PEW1 402 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 CERS6Q6ZMG9 384 aa14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 DNAJB7Q7Z6W7 309 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-217ENST00000581241 RANBP3LQ86VV4 465 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms