RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 APOLD1Q96LR9 279 aa15.28■□□□□ 0.04
SLC6A4-205ENST00000579221 BIRC8Q96P09 236 aa15.28■□□□□ 0.04
SLC6A4-205ENST00000579221 WASH6PQ9NQA3 447 aa15.28■□□□□ 0.04
SLC6A4-205ENST00000579221 PRDM8Q9NQV8 689 aa15.28■□□□□ 0.04
SLC6A4-205ENST00000579221 NINJ2Q9NZG7 142 aa15.28■□□□□ 0.04
SLC6A4-205ENST00000579221 VPS13AQ96RL7 3174 aa15.28■□□□□ 0.04
SLC6A4-205ENST00000579221 PLXNB3Q9ULL4 1909 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 PRR19A6NJB7 356 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 IQCF5A8MTL0 148 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 PDZK1P1A8MUH7 402 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 LIN7AO14910 233 aaPredicted RBP15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 TNFSF14O43557 240 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 F3P13726 295 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 CKMT2P17540 419 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 ITGB6P18564 788 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 HALP42357 657 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 DAB2P98082 770 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 RPA4Q13156 261 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 TRIP6Q15654 476 aaKnown RBP15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 ERCC6LQ2NKX8 1250 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 PROX2Q3B8N5 592 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 AGAP9Q5VTM2 703 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 CNSTQ6PJW8 725 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 FAM83HQ6ZRV2 1179 aaPredicted RBP15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 TRMT10CQ7L0Y3 403 aaKnown RBP15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 STRA8Q7Z7C7 330 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 KRT222Q8N1A0 295 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 OR6C4Q8NGE1 309 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 CDC42EP4Q9H3Q1 356 aaKnown RBP15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 TXNDC16Q9P2K2 825 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 FAM8A1Q9UBU6 413 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 PADI4Q9UM07 663 aa15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 V9GYY5 206 aaPredicted RBP15.27■□□□□ 0.04
SLC6A4-205ENST00000579221 MYO15AQ9UKN7 3530 aa15.27■□□□□ 0.03
SLC6A4-205ENST00000579221 TRBV23OR9-2A0A075B6M9 112 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 KIR2DS5A0A0G2JLQ3 304 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 A0A0G2JNG1 304 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 FAM159BA6NKW6 160 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 E5RI56 91 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 KIR2DS3K7RE56 304 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 NOBOXO60393 691 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 APOA4P06727 396 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 TUBBP07437 444 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 FAM153BP0C7A2 387 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 CKMT1AP12532 417 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 CEACAM1P13688 526 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 RPL10P27635 214 aaKnown RBP15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 GABRB3P28472 473 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 CCR7P32248 378 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 CD151P48509 253 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 PMS2P54278 862 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 BIRC2Q13490 618 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 KIR2DS5Q14953 304 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 BRD3Q15059 726 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 TMED2Q15363 201 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 SEPT7Q16181 437 aaKnown RBP15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 FAM153CQ494X1 144 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 SYTL3Q4VX76 610 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 C14orf28Q4W4Y0 310 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 CTSL3PQ5NE16 218 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 WDR93Q6P2C0 686 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 SLC9B2Q86UD5 537 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 CTAGE3PQ8IX95 158 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 SLC35F3Q8IY50 421 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 NAGSQ8N159 534 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 BAHD1Q8TBE0 780 aaPredicted RBP15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 MAPK15Q8TD08 544 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 ASZ1Q8WWH4 475 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 COG4Q9H9E3 785 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 RRAGDQ9NQL2 400 aaPredicted RBP15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 SMYD2Q9NRG4 433 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 LATS2Q9NRM7 1088 aa15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 CORO1CQ9ULV4 474 aaPredicted RBP15.26■□□□□ 0.03
SLC6A4-205ENST00000579221 LRP4O75096 1905 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 DMDP11532 3685 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 SLC5A10A0PJK1 596 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 EME2A4GXA9 379 aaPredicted RBP15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 A6NCN8 305 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 CXorf49A8MYA2 514 aaPredicted RBP15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 ACSL3O95573 720 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 EML2O95834 649 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 F7P08709 466 aaPredicted RBP15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 SLC35G4P0C7Q5 338 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 XRCC1P18887 633 aaPredicted RBP15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 AOAHP28039 575 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 VSNL1P62760 191 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 NAB1Q13506 487 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 KBTBD12Q3ZCT8 623 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 ZNF658BQ4V348 819 aaPredicted RBP15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 UGT3A1Q6NUS8 523 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 ZNF549Q6P9A3 640 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 OTOAQ7RTW8 1153 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 GLRX5Q86SX6 157 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 C17orf82Q86X59 251 aaPredicted RBP15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 SFRP1Q8N474 314 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 ARL14Q8N4G2 192 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 PPM1NQ8N819 430 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 AVL9Q8NBF6 648 aa15.25■□□□□ 0.03
SLC6A4-205ENST00000579221 KYQ8NBH2 561 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms