RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 KCNJ13O60928 360 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 COQ9O75208 318 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 KRT34O76011 436 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SERPINA3P01011 423 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PROS1P07225 676 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PRKAR1AP10644 381 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PCSK2P16519 638 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CCNA2P20248 432 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ENDOUP21128 410 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SLC26A3P40879 764 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 DNASE1L1P49184 302 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 FNTBP49356 437 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 GALK1P51570 392 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 KCNQ1P51787 676 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PLA2G16P53816 162 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PPP2R2AP63151 447 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 DSC2Q02487 901 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 OVGP1Q12889 678 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ECH1Q13011 328 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 DSG2Q14126 1118 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SEMA3AQ14563 771 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 DECR1Q16698 335 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 HYIQ5T013 277 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ENPP6Q6UWR7 440 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 TMC3Q7Z5M5 1100 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 EXOC3L1Q86VI1 746 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 JAZF1Q86VZ6 243 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 KATNAL2Q8IYT4 538 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SYNPOQ8N3V7 929 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 FBXL6Q8N531 539 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 TERB1Q8NA31 727 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 TRPV3Q8NET8 790 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 OR5T3Q8NGG3 340 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 OR6N1Q8NGY5 312 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 OR2AJ1Q8NGZ0 328 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 RDH11Q8TC12 318 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CENPIQ92674 756 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 EZH1Q92800 747 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 KAT5Q92993 513 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 EMID1Q96A84 441 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 EXOSC8Q96B26 276 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 TPD52L3Q96J77 140 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ZNF641Q96N77 438 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PTCHD1Q96NR3 888 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CDX2Q99626 313 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PELOQ9BRX2 385 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CEP44Q9C0F1 390 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ST6GALNAC4Q9H4F1 302 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 MRM3Q9HC36 420 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ETNK2Q9NVF9 386 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 DMGDHQ9UI17 866 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PHF11Q9UIL8 331 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PCDHB10Q9UN67 800 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SRPK3Q9UPE1 567 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 MTO1Q9Y2Z2 717 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 VWA7Q9Y334 891 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CAB39Q9Y376 341 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PCDHGA11Q9Y5H2 935 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 LYVE1Q9Y5Y7 322 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 UBR1Q8IWV7 1749 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 MRC1P22897 1456 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CDC14CA4D256 554 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CCDC154A6NI56 674 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 DUXAA6NLW8 204 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 E7EQ34 232 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 LIN7AO14910 233 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 TFECO14948 347 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 KIF1CO43896 1103 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 LATS1O95835 1130 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ESR1P03372 595 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ITGB1P05556 798 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CAPN1P07384 714 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 DCNP07585 359 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SPATA31C1P0DKV0 1188 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SRFP11831 508 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ZNF823P16415 610 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 LBPP18428 481 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 TFEBP19484 476 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 HRH2P25021 359 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CXCR1P25024 350 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 LMO2P25791 158 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 HSD17B3P37058 310 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PTGER3P43115 390 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SERPINB10P48595 397 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CDK7P50613 346 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 UBE2NP61088 152 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 HHEXQ03014 270 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CYP4F3Q08477 520 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 C2orf80Q0P641 193 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 MYBPHQ13203 477 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 DPYSL3Q14195 570 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 MAPK14Q16539 360 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SAMD4BQ5PRF9 694 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ZCCHC12Q6PEW1 402 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 RBMS3Q6XE24 437 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 DNAJC14Q6Y2X3 702 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 C15orf39Q6ZRI6 1047 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 GPRIN3Q6ZVF9 776 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 TRPM8Q7Z2W7 1104 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 KCNK18Q7Z418 384 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms