RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SNX2O60749 519 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 CDK14O94921 469 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 EEF1DP29692 281 aaKnown RBP5.31□□□□□ -1.56
VAPA-203ENST00000577539 FOXA1P55317 472 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 SATB1Q01826 763 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 GRB7Q14451 532 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 IHHQ14623 411 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 TSNQ15631 228 aaKnown RBP5.31□□□□□ -1.56
VAPA-203ENST00000577539 ZRANB3Q5FWF4 1079 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 ZNF678Q5SXM1 525 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 CST9Q5W186 159 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 MSANTD2Q6P1R3 559 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 ELMSAN1Q6PJG2 1045 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 PAQR3Q6TCH7 311 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 CCDC103Q8IW40 242 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 MIER2Q8N344 545 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 PGBD5Q8N414 524 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 DNAJB14Q8TBM8 379 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 CANT1Q8WVQ1 401 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 ACDQ96AP0 544 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 ASB9Q96DX5 294 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 RCC1LQ96I51 464 aaKnown RBP5.31□□□□□ -1.56
VAPA-203ENST00000577539 HIC2Q96JB3 615 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 PKMYT1Q99640 499 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 CINPQ9BW66 212 aaPredicted RBP5.31□□□□□ -1.56
VAPA-203ENST00000577539 ZNF385DQ9H6B1 395 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 TCF7L1Q9HCS4 588 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 ACAD8Q9UKU7 415 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 NDUFAF1Q9Y375 327 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 DGKBQ9Y6T7 804 aa5.31□□□□□ -1.56
VAPA-203ENST00000577539 A0A0U1RQS6 177 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 ACOT8O14734 319 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 MUSKO15146 869 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 LDB2O43679 373 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CLASP2O75122 1294 aaKnown RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 RPP40O75818 363 aaKnown RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 UGT1A6P19224 532 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 DNAJB1P25685 340 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CCND3P30281 292 aaPredicted RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 RPS24P62847 133 aaKnown RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 HERVK_113P63132 956 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 IL10RBQ08334 325 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 DYNC1I2Q13409 638 aaKnown RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 POU4F3Q15319 338 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 OR4D1Q15615 310 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 PRSS53Q2L4Q9 553 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 NADK2Q4G0N4 442 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 ANKS6Q68DC2 871 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 BEND5Q7L4P6 421 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 GLT6D1Q7Z4J2 308 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 SPPL2CQ8IUH8 684 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 MARVELD2Q8N4S9 558 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 ARRDC2Q8TBH0 407 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 UBXN10Q96LJ8 280 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 FANCD2OSQ96PS1 177 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 HBEGFQ99075 208 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 TRMOQ9BU70 441 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 C1orf50Q9BV19 199 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 ERVK-6Q9BXR3 956 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 MEAF6Q9HAF1 191 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 TMEM248Q9NWD8 314 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CD274Q9NZQ7 290 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 RAB26Q9ULW5 256 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CEP350Q5VT06 3117 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 A0A1B0GVG6 124 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 PRSS51A0A1B0GVH4 220 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 SMIM31A0A1B0GVY4 71 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 PRAMEF27A3QJZ7 478 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 E5RI56 91 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 H3BMM5 538 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CDC7O00311 574 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 INPP4BO15327 924 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 SEPT4O43236 478 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 PEX11BO96011 259 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 CHEK2O96017 543 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 MT-ND1P03886 318 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 FGF1P05230 155 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 MMP2P08253 660 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 PABPC4LP0CB38 370 aaKnown RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 LBPP18428 481 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 HLA-DPA1P20036 260 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 TACR2P21452 398 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 IL10P22301 178 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 HOXC8P31273 242 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 HSPA13P48723 471 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 OXCT1P55809 520 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 RHDQ02161 417 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 RAD51Q06609 339 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 MGAT3Q09327 533 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 TWF1Q12792 350 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 NFYCQ13952 458 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 LRP8Q14114 963 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 SEMA3AQ14563 771 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 RFTN1Q14699 578 aaPredicted RBP5.3□□□□□ -1.56
VAPA-203ENST00000577539 WDR45BQ5MNZ6 344 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 ZNF549Q6P9A3 640 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 C16orf59Q7L2K0 433 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 RASAL3Q86YV0 1011 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 VPS33AQ96AX1 596 aa5.3□□□□□ -1.56
VAPA-203ENST00000577539 MYEOVQ96EZ4 313 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms