RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CNSTQ6PJW8 725 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 CCNI2Q6ZMN8 369 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-217ENST00000575711 PIP4P1Q86T03 277 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 CFAP206Q8IYR0 622 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 ARL10Q8N8L6 244 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 FAM181AQ8N9Y4 354 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 ELMO1Q92556 727 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 CNDP2Q96KP4 475 aaKnown RBP13.73□□□□□ -0.21
RPAIN-217ENST00000575711 CAMK1GQ96NX5 476 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 BIRC8Q96P09 236 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 CDC6Q99741 560 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 COG4Q9H9E3 785 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 SMYD2Q9NRG4 433 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 NCKIPSDQ9NZQ3 722 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 TXNDC16Q9P2K2 825 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 GULP1Q9UBP9 304 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 TBC1D29Q9UFV1 150 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 COMMD10Q9Y6G5 202 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 KNL1Q8NG31 2342 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 PRR19A6NJB7 356 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 FAM159BA6NKW6 160 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 IQCF5A8MTL0 148 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 E5RI56 91 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 LIN7AO14910 233 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-217ENST00000575711 AHSGP02765 367 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 FAM153BP0C7A2 387 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 F3P13726 295 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 CHRM3P20309 590 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 RPL10P27635 214 aaKnown RBP13.72□□□□□ -0.21
RPAIN-217ENST00000575711 HALP42357 657 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 PMS2P54278 862 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 DAB2P98082 770 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 NAB1Q13506 487 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 BOP1Q14137 746 aaKnown RBP13.72□□□□□ -0.21
RPAIN-217ENST00000575711 TMED2Q15363 201 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 NR0B2Q15466 257 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 RSPO4Q2I0M5 234 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-217ENST00000575711 KBTBD12Q3ZCT8 623 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 FAM153CQ494X1 144 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 AGAP9Q5VTM2 703 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 METRNLQ641Q3 311 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 OGFOD3Q6PK18 319 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 WASH2PQ6VEQ5 465 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 FAM83HQ6ZRV2 1179 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-217ENST00000575711 TRMT10CQ7L0Y3 403 aaKnown RBP13.72□□□□□ -0.21
RPAIN-217ENST00000575711 STRA8Q7Z7C7 330 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 CTAGE3PQ8IX95 158 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 KRT222Q8N1A0 295 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 DEFB124Q8NES8 71 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 LKAAEAR1Q8TD35 194 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 APOLD1Q96LR9 279 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 WASH6PQ9NQA3 447 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 PRDM8Q9NQV8 689 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 ACSL5Q9ULC5 683 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 CORO1CQ9ULV4 474 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-217ENST00000575711 DNAH14Q0VDD8 3507 aa13.72□□□□□ -0.21
RPAIN-217ENST00000575711 FAM186AA6NE01 2351 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 A6NCN8 305 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 OR5K4A6NMS3 321 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 CXorf49A8MYA2 514 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-217ENST00000575711 KPNA5O15131 536 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 NOBOXO60393 691 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 CBFA2T3O75081 653 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 NIPSNAP2O75323 286 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 EML2O95834 649 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 APOA4P06727 396 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 TUBBP07437 444 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 SLC35G4P0C7Q5 338 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 CSRP1P21291 193 aaKnown RBP13.71□□□□□ -0.21
RPAIN-217ENST00000575711 GABRB3P28472 473 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 CCR7P32248 378 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 DUSP3P51452 185 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-217ENST00000575711 PLOD1Q02809 727 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-217ENST00000575711 ILF2Q12905 390 aaKnown RBP13.71□□□□□ -0.21
RPAIN-217ENST00000575711 RPA4Q13156 261 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 BIRC2Q13490 618 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 PROX2Q3B8N5 592 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 C14orf28Q4W4Y0 310 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 ZNF549Q6P9A3 640 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 ABRAXAS1Q6UWZ7 409 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 OTOAQ7RTW8 1153 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 SLC35F3Q8IY50 421 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 NAGSQ8N159 534 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 PPM1NQ8N819 430 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 KYQ8NBH2 561 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 GPR156Q8NFN8 814 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 BAHD1Q8TBE0 780 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-217ENST00000575711 MAPK15Q8TD08 544 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 ASZ1Q8WWH4 475 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 KCNJ9Q92806 393 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 TMEM159Q96B96 161 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 CYTH2Q99418 400 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 CPNE1Q99829 537 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 RTKNQ9BST9 563 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 AARSD1Q9BTE6 412 aaKnown RBP13.71□□□□□ -0.21
RPAIN-217ENST00000575711 PARD6BQ9BYG5 372 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 PSAT1Q9Y617 370 aa13.71□□□□□ -0.21
RPAIN-217ENST00000575711 RIF1Q5UIP0 2472 aaKnown RBP13.7□□□□□ -0.22
RPAIN-217ENST00000575711 TDRD6O60522 2096 aaKnown RBP13.7□□□□□ -0.22
RPAIN-217ENST00000575711 A0A087WUV0 522 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms