RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 TACR2P21452 398 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 NDUFS1P28331 727 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 SLC8A1P32418 973 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 CIITAP33076 1130 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 HSPA4P34932 840 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 ARL2P36404 184 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 AVPR1AP37288 418 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 OPRD1P41143 372 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 PNPLA4P41247 253 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 TNFSF9P41273 254 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 CSNK1EP49674 416 aaKnown RBP5.52□□□□□ -1.53
SF3B3-214ENST00000572365 AGTR2P50052 363 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 TUBP50607 506 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 CACNA2D1P54289 1103 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 MPP1Q00013 466 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 HOXA4Q00056 320 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-214ENST00000572365 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.52□□□□□ -1.53
SF3B3-214ENST00000572365 SLC14A1Q13336 389 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 GAB1Q13480 694 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 PRPF4BQ13523 1007 aaKnown RBP5.52□□□□□ -1.53
SF3B3-214ENST00000572365 TFDP1Q14186 410 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 MAPRE1Q15691 268 aaKnown RBP5.52□□□□□ -1.53
SF3B3-214ENST00000572365 IGFBP7Q16270 282 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 FBXO43Q4G163 708 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 ATG16L1Q676U5 607 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 NCAPH2Q6IBW4 605 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 CENPPQ6IPU0 288 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 TMEM88Q6PEY1 159 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 TRIM72Q6ZMU5 477 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 SYNE3Q6ZMZ3 975 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 TMEM150AQ86TG1 271 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 Q8N1X5 172 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 AMER2Q8N7J2 671 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 EXD3Q8N9H8 876 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 TBCKQ8TEA7 893 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 NEU4Q8WWR8 484 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-214ENST00000572365 TCP11Q8WWU5 503 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 FGF11Q92914 225 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 ARRDC3Q96B67 414 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 DAZAP1Q96EP5 407 aaKnown RBP5.52□□□□□ -1.53
SF3B3-214ENST00000572365 CCDC51Q96ER9 411 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 TIGD1Q96MW7 591 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 LGMNQ99538 433 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 JPH2Q9BR39 696 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-214ENST00000572365 ADGRE3Q9BY15 652 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 GPR63Q9BZJ6 419 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 PDE11AQ9HCR9 933 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 VPS54Q9P1Q0 977 aa5.52□□□□□ -1.53
SF3B3-214ENST00000572365 NOL7Q9UMY1 257 aaKnown RBP5.52□□□□□ -1.53
SF3B3-214ENST00000572365 HEMK1Q9Y5R4 338 aaPredicted RBP5.52□□□□□ -1.53
SF3B3-214ENST00000572365 TCRBV5S1A1TA0A578 114 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 MTMR11A4FU01 709 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 A6NLC8 198 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 TTC34A8MYJ7 566 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 WASH3PC4AMC7 463 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 PRYO14603 147 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 SLC37A4O43826 429 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 EXOC3O60645 756 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 USO1O60763 962 aaKnown RBP5.51□□□□□ -1.53
SF3B3-214ENST00000572365 KAT7O95251 611 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 HNRNPCP07910 306 aaKnown RBP eCLIP5.51□□□□□ -1.531e-9■■□□□ 12.3
SF3B3-214ENST00000572365 ACP5P13686 325 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 ATF6P18850 670 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 HOXD12P35452 270 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 STAT6P42226 847 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 LIFRP42702 1097 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 IFNAR2P48551 515 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 DMP1Q13316 513 aaPredicted RBP5.51□□□□□ -1.53
SF3B3-214ENST00000572365 THOC5Q13769 683 aaKnown RBP5.51□□□□□ -1.53
SF3B3-214ENST00000572365 MXD4Q14582 209 aaPredicted RBP5.51□□□□□ -1.53
SF3B3-214ENST00000572365 MFSD13AQ14CX5 517 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 LARS2Q15031 903 aaKnown RBP5.51□□□□□ -1.53
SF3B3-214ENST00000572365 CNGA3Q16281 694 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 ZXDCQ2QGD7 858 aaPredicted RBP5.51□□□□□ -1.53
SF3B3-214ENST00000572365 KCNT1Q5JUK3 1230 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 WDR45BQ5MNZ6 344 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 CBWD5Q5RIA9 395 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 TSTD2Q5T7W7 516 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 ZNF280DQ6N043 979 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 DENND1BQ6P3S1 775 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 KIAA1324Q6UXG2 1013 aaKnown RBP5.51□□□□□ -1.53
SF3B3-214ENST00000572365 DCDC5Q6ZRR9 648 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 GLRX5Q86SX6 157 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 HEATR4Q86WZ0 1026 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 CACUL1Q86Y37 369 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 ARL14EPQ8N8R7 260 aaPredicted RBP5.51□□□□□ -1.53
SF3B3-214ENST00000572365 LEMD2Q8NC56 503 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 SRFBP1Q8NEF9 429 aaKnown RBP5.51□□□□□ -1.53
SF3B3-214ENST00000572365 PSMG2Q969U7 264 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 REPS1Q96D71 796 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 MED8Q96G25 268 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 HIC2Q96JB3 615 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 UROC1Q96N76 676 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 ACOX2Q99424 681 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 LXNQ9BS40 222 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 GPR174Q9BXC1 333 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 C6orf50Q9HD87 102 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 SLC22A11Q9NSA0 550 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 SLC17A6Q9P2U8 582 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 TUBGCP4Q9UGJ1 667 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms