RNA–Protein interactions for RNA: ENST00000572360.5

TOM1L1-212, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-212ENST00000572360 VPS45Q9NRW7 570 aa4.09□□□□□ -1.75
TOM1L1-212ENST00000572360 RNF146Q9NTX7 359 aa4.09□□□□□ -1.75
TOM1L1-212ENST00000572360 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.09□□□□□ -1.75
TOM1L1-212ENST00000572360 IRAK4Q9NWZ3 460 aa4.09□□□□□ -1.75
TOM1L1-212ENST00000572360 EPS15L1Q9UBC2 864 aa4.09□□□□□ -1.75
TOM1L1-212ENST00000572360 IPO11Q9UI26 975 aaKnown RBP4.09□□□□□ -1.75
TOM1L1-212ENST00000572360 CYTH4Q9UIA0 394 aa4.09□□□□□ -1.75
TOM1L1-212ENST00000572360 KCNE5Q9UJ90 142 aa4.09□□□□□ -1.75
TOM1L1-212ENST00000572360 RIMS3Q9UJD0 308 aa4.09□□□□□ -1.75
TOM1L1-212ENST00000572360 SARDHQ9UL12 918 aa4.09□□□□□ -1.75
TOM1L1-212ENST00000572360 TNFSF13BQ9Y275 285 aa4.09□□□□□ -1.75
TOM1L1-212ENST00000572360 RAP2CQ9Y3L5 183 aa4.09□□□□□ -1.75
TOM1L1-212ENST00000572360 FAM170AA1A519 330 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 SH3PXD2BA1X283 911 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 TRIM64BA6NI03 449 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 TRPC5OSA6NMA1 111 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 TCP10L2B9ZVM9 353 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 C19orf81C9J6K1 198 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 E9PBE3 544 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ACKR2O00590 384 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 TRIM38O00635 465 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 CYB561D2O14569 222 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ACOT8O14734 319 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 TPP1O14773 563 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 HDAC3O15379 428 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 NCAM2O15394 837 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ZSCAN9O15535 394 aaPredicted RBP4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 PSMD3O43242 534 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 TIMM44O43615 452 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ITM2AO43736 263 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 CBFA2T3O75081 653 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 COQ9O75208 318 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 AVILO75366 819 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 TRMUO75648 421 aaKnown RBP4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 USP1O94782 785 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 H6PDO95479 791 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 METTL18O95568 372 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 HSPA4LO95757 839 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ALDOAP04075 364 aaKnown RBP4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 AMY1AP04745 511 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 POLBP06746 335 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 MYL3P08590 195 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 SRGAP2BP0DMP2 458 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 CDK4P11802 303 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 MYCLP1P12525 358 aaPredicted RBP4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 CD19P15391 556 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 PDGFRAP16234 1089 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 CDH2P19022 906 aaPredicted RBP4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ME2P23368 584 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 POLR2AP24928 1970 aaKnown RBP4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 PIK3R1P27986 724 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 SDC4P31431 198 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 SERPINB6P35237 376 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 PPARGP37231 505 aaPredicted RBP4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 NPY2RP49146 381 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 GLUD2P49448 558 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ATP4BP51164 291 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ZNF135P52742 658 aaPredicted RBP4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 LIMK2P53671 638 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 EPHB1P54762 984 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 AIF1P55008 147 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 SOX10P56693 466 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 NUP107P57740 925 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 KRTAP10-9P60411 292 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 MYBPC1Q00872 1141 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 PRKAA1Q13131 559 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 TNFAIP1Q13829 316 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 SCN9AQ15858 1988 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 CNGA3Q16281 694 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 PSMD5Q16401 504 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 SMTNL2Q2TAL5 461 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 GRAMD1BQ3KR37 738 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 NADK2Q4G0N4 442 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 KCTD21Q4G0X4 260 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 NOMO2Q5JPE7 1267 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 KCNT1Q5JUK3 1230 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ARHGAP17Q68EM7 881 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ZYG11AQ6WRX3 759 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 RBM44Q6ZP01 1051 aaKnown RBP4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 LINC00299Q6ZSB3 139 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 DENND5BQ6ZUT9 1274 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 STRADAQ7RTN6 431 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 PLPPR4Q7Z2D5 763 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 SATL1Q86VE3 508 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 UNC93AQ86WB7 457 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 CARM1Q86X55 608 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 HPS6Q86YV9 775 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 CHERPQ8IWX8 916 aaKnown RBP4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 KLHDC8BQ8IXV7 354 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 BBS5Q8N3I7 341 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 LNX2Q8N448 690 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ZNF420Q8TAQ5 688 aaPredicted RBP4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 TMEM143Q96AN5 459 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ASB9Q96DX5 294 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 RNF31Q96EP0 1072 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 SGF29Q96ES7 293 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 VPS50Q96JG6 964 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 MAELQ96JY0 434 aaKnown RBP4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 FAR2Q96K12 515 aa4.08□□□□□ -1.76
TOM1L1-212ENST00000572360 ZBTB45Q96K62 511 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms