RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 VPS18Q9P253 973 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 SLC17A6Q9P2U8 582 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 FETUBQ9UGM5 382 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 COQ6Q9Y2Z9 468 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 TRBV5-4A0A0C4DH59 114 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 GLYATL1P3A0A0U1RQE8 302 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 CPED1A4D0V7 1026 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 IGLON5A6NGN9 336 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 SASH3O75995 380 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 RECQL5O94762 991 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 MC4RP32245 332 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 CA5AP35218 305 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 ZNF844Q08AG5 666 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 FGL2Q14314 439 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 ACOX1Q15067 660 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 KLHL38Q2WGJ6 581 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 LINC00303Q3SY05 128 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 C6orf132Q5T0Z8 1188 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 ALS2CLQ60I27 953 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 SEL1L3Q68CR1 1132 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 KIAA1161Q6NSJ0 714 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 LRIG3Q6UXM1 1119 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 KYAT3Q6YP21 454 aaKnown RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 GCNT7Q6ZNI0 430 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 USP53Q70EK8 1073 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 MARK2Q7KZI7 788 aaKnown RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 EFL1Q7Z2Z2 1120 aaKnown RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 PTAR1Q7Z6K3 402 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 NLRP8Q86W28 1048 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 PARGQ86W56 976 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 LMNTD2Q8IXW0 634 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 BTN2A2Q8WVV5 523 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 SCAMP4Q969E2 229 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 LIN37Q96GY3 246 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 TMEM109Q9BVC6 243 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 FAM83DQ9H4H8 585 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 VIPAS39Q9H9C1 493 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 RAD18Q9NS91 495 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 IARS2Q9NSE4 1012 aaKnown RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 APPL1Q9UKG1 709 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 PSAT1Q9Y617 370 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 CD3EAPO15446 510 aaKnown RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 GPR39O43194 453 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 EFSO43281 561 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 AQP9O43315 295 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 UGT1A9O60656 530 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 SRP72O76094 671 aaKnown RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 PCDH8O95206 1070 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 PRAMEF1O95521 474 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 PRSS56P0CW18 603 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 MYF5P13349 255 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 ITGB6P18564 788 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 SLC1A2P43004 574 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 RABIFP47224 123 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 CDKN1CP49918 316 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 EIF3BP55884 814 aaKnown RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 RPS21P63220 83 aaKnown RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 DPTQ07507 201 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 NFATC2Q13469 925 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 NAB1Q13506 487 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 FZD2Q14332 565 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 SEMA3AQ14563 771 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 NR0B2Q15466 257 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 CHRNA6Q15825 494 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 ZNF470Q6ECI4 717 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 GUSBP11Q6P575 273 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 FAM151BQ6UXP7 276 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 SLC26A11Q86WA9 606 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 LRRC6Q86X45 466 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 CILP2Q8IUL8 1156 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 SLC44A1Q8WWI5 657 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 ASB12Q8WXK4 309 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 MYOCQ99972 504 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 FAM167BQ9BTA0 163 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 RIOK2Q9BVS4 552 aaKnown RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 UGT1A7Q9HAW7 530 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 UGT1A10Q9HAW8 530 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 UGT1A8Q9HAW9 530 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 PPANQ9NQ55 473 aaKnown RBP13.56□□□□□ -0.24
RPAIN-209ENST00000571558 CATSPERZQ9NTU4 200 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 EURLQ9NYK6 297 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 ZFATQ9P243 1243 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 CD84Q9UIB8 345 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 TMPRSS11EQ9UL52 423 aa13.56□□□□□ -0.24
RPAIN-209ENST00000571558 LRRK2Q5S007 2527 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 LRRK1Q38SD2 2015 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 EXOC1LA0A1B0GW35 172 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 AGPSO00116 658 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 TM7SF2O76062 418 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 SOD1P00441 154 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 GABRB3P28472 473 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 CLDN2P57739 230 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 CACNG1Q06432 222 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 CTBP1Q13363 440 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 THOC5Q13769 683 aaKnown RBP13.55□□□□□ -0.24
RPAIN-209ENST00000571558 RASA2Q15283 850 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 TYSND1Q2T9J0 566 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 GPR33Q49SQ1 333 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 ATP13A5Q4VNC0 1218 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 MRNIPQ6NTE8 343 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms