RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 CAMK2DQ13557 499 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 ALCAMQ13740 583 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 SNTB1Q13884 538 aaKnown RBP3.71□□□□□ -1.82
UBR1-211ENST00000569971 NEDD9Q14511 834 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 COG2Q14746 738 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 ZRSR1Q15695 479 aaKnown RBP3.71□□□□□ -1.82
UBR1-211ENST00000569971 EIF2S3LQ2VIR3 472 aaKnown RBP3.71□□□□□ -1.82
UBR1-211ENST00000569971 SUPT20HL1Q3ZLR7 823 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 NUGGCQ68CJ6 796 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 DEF8Q6ZN54 512 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 DPPA4Q7L190 304 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 SDCCAG8Q86SQ7 713 aaPredicted RBP3.71□□□□□ -1.82
UBR1-211ENST00000569971 ARID3BQ8IVW6 561 aaPredicted RBP3.71□□□□□ -1.82
UBR1-211ENST00000569971 CEP97Q8IW35 865 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 SFTPA2Q8IWL1 248 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 HACE1Q8IYU2 909 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 SPATA6LQ8N4H0 392 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 SCCPDHQ8NBX0 429 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 MCUQ8NE86 351 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 AGBL3Q8NEM8 1001 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 NCOA7Q8NI08 942 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 ARRDC2Q8TBH0 407 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 PTPMT1Q8WUK0 201 aaPredicted RBP3.71□□□□□ -1.82
UBR1-211ENST00000569971 SMG7Q92540 1137 aaKnown RBP3.71□□□□□ -1.82
UBR1-211ENST00000569971 SECISBP2LQ93073 1101 aaKnown RBP3.71□□□□□ -1.82
UBR1-211ENST00000569971 ZNF622Q969S3 477 aaKnown RBP eCLIP3.71□□□□□ -1.821e-6■■■□□ 16.5
UBR1-211ENST00000569971 ZNF653Q96CK0 615 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 RMDN1Q96DB5 314 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 PUS3Q9BZE2 481 aaKnown RBP3.71□□□□□ -1.82
UBR1-211ENST00000569971 RSPH9Q9H1X1 276 aaPredicted RBP3.71□□□□□ -1.82
UBR1-211ENST00000569971 CLSTN2Q9H4D0 955 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 ST6GALNAC4Q9H4F1 302 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 PSD3Q9NYI0 1048 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 GDE1Q9NZC3 331 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 COPG2Q9UBF2 871 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 SLC9A2Q9UBY0 812 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 RCOR1Q9UKL0 485 aa3.71□□□□□ -1.82
UBR1-211ENST00000569971 DISP2A7MBM2 1401 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 ATRNO75882 1429 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 RIC1Q4ADV7 1423 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 COL22A1Q8NFW1 1626 aaPredicted RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 ITGB4P16144 1822 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 KLF18A0A0U1RQI7 1052 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 LNP1A1A4G5 178 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 FAM170AA1A519 330 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 WIPF3A6NGB9 483 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 KCNU1A8MYU2 1149 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 GOLGA6L19H0YKK7 550 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 GPAA1O43292 621 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 TADA2AO75478 443 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 RBMXL2O75526 392 aaKnown RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 IDH1O75874 414 aaKnown RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 RSL1D1O76021 490 aaKnown RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 KCNK5O95279 499 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 BCL10O95999 233 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 IFNA2P01563 188 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 SCG2P13521 617 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 MYF6P23409 242 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 ADORA1P30542 326 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 EIF2S3P41091 472 aaKnown RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 MSH2P43246 934 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 ME1P48163 572 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 P2RX3P56373 397 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 SELENOVP59797 346 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 TPM4P67936 248 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 CXCL9Q07325 125 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 SCARB2Q14108 478 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 TRIM29Q14134 588 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 IL11RAQ14626 422 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 INPP5JQ15735 1006 aaPredicted RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 CAMK4Q16566 473 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 STX1AQ16623 288 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 DUSP6Q16828 381 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 PNLIPRP3Q17RR3 467 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 LETM2Q2VYF4 491 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 CRY2Q49AN0 593 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 CCDC152Q4G0S7 254 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 PARP10Q53GL7 1025 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 ZNF805Q5CZA5 627 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 DNTTIP2Q5QJE6 756 aaKnown RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 KRT80Q6KB66 452 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 SLC18B1Q6NT16 456 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 FAM173BQ6P4H8 233 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 B3GNT6Q6ZMB0 384 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 STOX1Q6ZVD7 989 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 TAOK1Q7L7X3 1001 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 YTHDF3Q7Z739 585 aaKnown RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 ANKRD13BQ86YJ7 626 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 MCEMP1Q8IX19 187 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 MMP21Q8N119 569 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 GUF1Q8N442 669 aaKnown RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 GPATCH11Q8N954 259 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 GOT1L1Q8NHS2 421 aaPredicted RBP3.7□□□□□ -1.82
UBR1-211ENST00000569971 GSDMBQ8TAX9 411 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 TRPC4APQ8TEL6 797 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 DDB2Q92466 427 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 INPP5DQ92835 1189 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 MOAP1Q96BY2 351 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 C8orf76Q96K31 380 aa3.7□□□□□ -1.82
UBR1-211ENST00000569971 CEP295NLQ96MC4 621 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms