RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 RAB26Q9ULW5 256 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 ANGPTL3Q9Y5C1 460 aa8.65□□□□□ -1.03
LINC00558-201ENST00000569422 DHRS12A0PJE2 317 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 TYW5A2RUC4 315 aaKnown RBP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 DENRO43583 198 aaKnown RBP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 SLC22A3O75751 556 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 SLC25A14O95258 325 aaPredicted RBP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 ESRRBO95718 433 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 TSPAN12O95859 305 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 TFAP2AP05549 437 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 HNRNPCP07910 306 aaKnown RBP eCLIP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 SMIM18P0DKX4 95 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 IDO1P14902 403 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 SLC7A1P30825 629 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 HOXD11P31277 338 aaPredicted RBP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 ACADVLP49748 655 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 PRKCQQ04759 706 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 MRPL28Q13084 256 aaKnown RBP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 ATP6AP1LQ52LC2 224 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 SLC8B1Q6J4K2 584 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 MBOAT1Q6ZNC8 495 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 SERPINA9Q86WD7 417 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 METTL25Q8N6Q8 603 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 TRIML2Q8N7C3 387 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 TEX19Q8NA77 164 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 LKAAEAR1Q8TD35 194 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 MYLIPQ8WY64 445 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 SLC35B4Q969S0 331 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 TMEM169Q96HH4 297 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 IGSF21Q96ID5 467 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 ASB2Q96Q27 587 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 CDK5RAP1Q96SZ6 601 aaKnown RBP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 TTLL2Q9BWV7 592 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 CLPBQ9H078 707 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 SOX17Q9H6I2 414 aaPredicted RBP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 ELAC1Q9H777 363 aaKnown RBP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 GID8Q9NWU2 228 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 HACD3Q9P035 362 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 MTRRQ9UBK8 725 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 ZNF711Q9Y462 761 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 OAS3Q9Y6K5 1087 aaKnown RBP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 PRSS21Q9Y6M0 314 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 SLC4A7Q9Y6M7 1214 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 PTPRDP23468 1912 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 MIA3Q5JRA6 1907 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 VWA8A3KMH1 1905 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 KRT87PA6NCN2 255 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 TNFAIP8O95379 198 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 PCNAP12004 261 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 MTPNP58546 118 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 HTRA3P83110 453 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 LIPEQ05469 1076 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 SLC44A4Q53GD3 710 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 BLOC1S3Q6QNY0 202 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 DET1Q7L5Y6 550 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 TICAM1Q8IUC6 712 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 GALNT15Q8N3T1 639 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 PDZD8Q8NEN9 1154 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 CLHC1Q8NHS4 586 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 CYGBQ8WWM9 190 aa8.64□□□□□ -1.03
LINC00558-201ENST00000569422 KCTD14Q9BQ13 255 aaPredicted RBP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 SDR39U1Q9NRG7 319 aaPredicted RBP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 NOSIPQ9Y314 301 aaKnown RBP8.64□□□□□ -1.03
LINC00558-201ENST00000569422 A0A1B0GVG6 124 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 POM121CA8CG34 1229 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 FXYD1O00168 92 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 E2F3O00716 465 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 PRMT5O14744 637 aaPredicted RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 ARPC2O15144 300 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 C8BP07358 591 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 RPS17P08708 135 aaKnown RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 GNAO1P09471 354 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 UROSP10746 265 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 G6PDP11413 515 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 HOXB8P17481 243 aaPredicted RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 IL10P22301 178 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 HSD3B2P26439 372 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 IL12AP29459 219 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 HMOX2P30519 316 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 STK19P49842 368 aaPredicted RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 POLR2JP52435 117 aaKnown RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 HMGCS1Q01581 520 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 TNK2Q07912 1038 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 SMARCB1Q12824 385 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 DEFB115Q30KQ5 88 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 C6orf136Q5SQH8 315 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 NCEH1Q6PIU2 408 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 TSPAN33Q86UF1 283 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 FAM47BQ8NA70 645 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 OR4F6Q8NGB9 312 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 PEX13Q92968 403 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 PLD4Q96BZ4 506 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 ROPN1LQ96C74 230 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 KLF16Q9BXK1 252 aaPredicted RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 ALG2Q9H553 416 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 IPPKQ9H8X2 491 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 ZFYVE1Q9HBF4 777 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 POPDC3Q9HBV1 291 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 ZNF334Q9HCZ1 680 aaPredicted RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 LHX3Q9UBR4 397 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms