RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PANX1Q96RD7 426 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 DHRS9Q9BPW9 319 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 PBDC1Q9BVG4 233 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 BTBD1Q9H0C5 482 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 GAREM1Q9H706 876 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ERVK-5Q9HDB9 667 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 DPP3Q9NY33 737 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 TAS2R8Q9NYW2 309 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 OAZ3Q9UMX2 235 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 COG5Q9UP83 839 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 CRYL1Q9Y2S2 319 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 SNX10Q9Y5X0 201 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 PRSS44E7EML9 344 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 LRRN3E7EW58 273 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 SNAPINO95295 136 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 HTR1EP28566 365 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 DGKQP52824 942 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 GRSF1Q12849 480 aaKnown RBP eCLIP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 TMEM214Q6NUQ4 689 aaKnown RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 PRSS48Q7RTY5 328 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 WNT8BQ93098 351 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 LGALS12Q96DT0 336 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 SEPT5Q99719 369 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 POLR1EQ9GZS1 481 aaKnown RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 LRRN3Q9H3W5 708 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 C3orf14Q9HBI5 128 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 DAGLAQ9Y4D2 1042 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 COL3A1P02461 1466 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 FAM159BA6NKW6 160 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 EPHB6O15197 1021 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 MTHFD1P11586 935 aaKnown RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 MPSTP25325 297 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 DEFA6Q01524 100 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ABHD18Q0P651 414 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 KCNJ8Q15842 424 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 PCSK7Q16549 785 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ZACNQ401N2 412 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 DCST1Q5T197 706 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 C1orf186Q6ZWK4 172 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 OR8J3Q8NGG0 315 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SLC35B2Q8TB61 432 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF597Q96LX8 424 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 CEP295NLQ96MC4 621 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 FAM129BQ96TA1 746 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 GAD1Q99259 594 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 PIDD1Q9HB75 910 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 KCNH7Q9NS40 1196 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 TAS2R3Q9NYW6 316 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 A0A087WZ62 844 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ASTN1O14525 1302 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 HSD17B1P14061 328 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 YWHAQP27348 245 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 CDKN2BP42772 138 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SEMA5AQ13591 1074 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 TLR1Q15399 786 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 COMMD7Q86VX2 200 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ZC3H7AQ8IWR0 971 aaKnown RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SCN4BQ8IWT1 228 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SPATA6LQ8N4H0 392 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 MFSD14AQ96MC6 490 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 HSPA12BQ96MM6 686 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 C12orf65Q9H3J6 166 aaKnown RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ALG9Q9H6U8 611 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ARHGAP23Q9P227 1491 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ZBTB14O43829 449 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 PAHP00439 452 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ERVK-10P10266 1014 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 POLR2CP19387 275 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 AXLP30530 894 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 GSTM4Q03013 218 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF177Q13360 481 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SIM2Q14190 667 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 CRTC2Q53ET0 693 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 RAB41Q5JT25 222 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 GCNT6Q5T4J0 391 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 GPR158Q5T848 1215 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 TWIST2Q8WVJ9 160 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 KIAA1143Q96AT1 154 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 KLHL5Q96PQ7 755 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 TBCDQ9BTW9 1192 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 UCK2Q9BZX2 261 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 MTG2Q9H4K7 406 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 RERGLQ9H628 205 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 RNF121Q9H920 327 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 TREM1Q9NP99 234 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 UFSP2Q9NUQ7 469 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 LRFN2Q9ULH4 789 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 UGT2A1Q9Y4X1 527 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 F5H5T6 163 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 MITFO75030 526 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ODC1P11926 461 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 RPL4P36578 427 aaKnown RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 PLK1P53350 603 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 TSPAN5P62079 268 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 PFKFB4Q16877 469 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 IL31Q6EBC2 164 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SLC25A25Q6KCM7 469 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 FIBCD1Q8N539 461 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 TMEM161BQ8NDZ6 487 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms