RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.43■□□□□ 0.54
MSLN-207ENST00000566549 RIC8BQ9NVN3 520 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 SLC4A7Q9Y6M7 1214 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 FFAR3O14843 346 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 GPR42O15529 346 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 CCR2P41597 374 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 RGS4P49798 205 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 POLR2JP52435 117 aaKnown RBP18.43■□□□□ 0.54
MSLN-207ENST00000566549 SLC7A9P82251 487 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 ABRAXAS2Q15018 415 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 NR6A1Q15406 480 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 HMBOX1Q6NT76 420 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 CRTC1Q6UUV9 634 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 ZBTB2Q8N680 514 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 RIN3Q8TB24 985 aa18.43■□□□□ 0.54
MSLN-207ENST00000566549 PDLIM5Q96HC4 596 aaKnown RBP18.43■□□□□ 0.54
MSLN-207ENST00000566549 TAPBPO15533 448 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 DENRO43583 198 aaKnown RBP18.42■□□□□ 0.54
MSLN-207ENST00000566549 SOCS5O75159 536 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 MTHFD1P11586 935 aaKnown RBP18.42■□□□□ 0.54
MSLN-207ENST00000566549 ZNF26P17031 533 aaPredicted RBP18.42■□□□□ 0.54
MSLN-207ENST00000566549 CCNHP51946 323 aaPredicted RBP18.42■□□□□ 0.54
MSLN-207ENST00000566549 PLIN5Q00G26 463 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 FAM126AQ9BYI3 521 aaPredicted RBP18.42■□□□□ 0.54
MSLN-207ENST00000566549 WWOXQ9NZC7 414 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 SUN2Q9UH99 717 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 RAB26Q9ULW5 256 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 ZBBXA8MT70 800 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 PGM3O95394 542 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 CXCL14O95715 111 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 NCK1P16333 377 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 CKMT2P17540 419 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 RPS3P23396 243 aaKnown RBP eCLIP18.42■□□□□ 0.54
MSLN-207ENST00000566549 MAPK8P45983 427 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 RPL26P61254 145 aaKnown RBP18.42■□□□□ 0.54
MSLN-207ENST00000566549 PCBP2Q15366 365 aaKnown RBP eCLIP18.42■□□□□ 0.54
MSLN-207ENST00000566549 PRMT9Q6P2P2 845 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 SLC2A7Q6PXP3 512 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 MILR1Q7Z6M3 343 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 CPXM2Q8N436 756 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 MARVELD2Q8N4S9 558 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 PROKR1Q8TCW9 393 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 TSC22D3Q99576 134 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 SLC29A1Q99808 456 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 BRINP2Q9C0B6 783 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 INTS7Q9NVH2 962 aaKnown RBP18.42■□□□□ 0.54
MSLN-207ENST00000566549 TMCO1Q9UM00 188 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 USP22Q9UPT9 525 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 ANGPTL3Q9Y5C1 460 aa18.42■□□□□ 0.54
MSLN-207ENST00000566549 TNPO3Q9Y5L0 923 aaKnown RBP18.42■□□□□ 0.54
MSLN-207ENST00000566549 C7orf72A4D263 438 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 FAM149AA5PLN7 773 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 TRIM43BA6NCK2 446 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 NEDD8-MDP1E9PL57 170 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 KIF1CO43896 1103 aaKnown RBP18.41■□□□□ 0.54
MSLN-207ENST00000566549 UGT2B4P06133 528 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 G6PDP11413 515 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 LHCGRP22888 699 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 DGKAP23743 735 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 GRM2Q14416 872 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 LRRC26Q2I0M4 334 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 ASTLQ6HA08 431 aaPredicted RBP18.41■□□□□ 0.54
MSLN-207ENST00000566549 TMEM25Q86YD3 366 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 NXPE1Q8N323 547 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 KREMEN2Q8NCW0 462 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 VOPP1Q96AW1 172 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 TRIM43Q96BQ3 446 aaPredicted RBP18.41■□□□□ 0.54
MSLN-207ENST00000566549 TCEAL4Q96EI5 215 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 CD84Q9UIB8 345 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 SLCO3A1Q9UIG8 710 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 POLR3HQ9Y535 204 aaPredicted RBP18.41■□□□□ 0.54
MSLN-207ENST00000566549 CDH23Q9H251 3354 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 TRBV5-4A0A0C4DH59 114 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 ARPC2O15144 300 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 CTSAP10619 480 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 HMOX2P30519 316 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 PPM1AP35813 382 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 NAA20P61599 178 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 SNRPD1P62314 119 aaKnown RBP18.41■□□□□ 0.54
MSLN-207ENST00000566549 TRAF3Q13114 568 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 MYLK3Q32MK0 819 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 SGO1Q5FBB7 561 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 C22orf39Q6P5X5 142 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 IYDQ6PHW0 289 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 DET1Q7L5Y6 550 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 APLFQ8IW19 511 aaPredicted RBP18.41■□□□□ 0.54
MSLN-207ENST00000566549 TMEM125Q96AQ2 219 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 ASAH2Q9NR71 780 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 ZNF510Q9Y2H8 683 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 PCDHA9Q9Y5H5 950 aa18.41■□□□□ 0.54
MSLN-207ENST00000566549 PRRC2BQ5JSZ5 2229 aaKnown RBP18.41■□□□□ 0.54
MSLN-207ENST00000566549 OXTRP30559 389 aa18.4■□□□□ 0.54
MSLN-207ENST00000566549 ATP13A5Q4VNC0 1218 aa18.4■□□□□ 0.54
MSLN-207ENST00000566549 RFTN2Q52LD8 501 aaPredicted RBP18.4■□□□□ 0.54
MSLN-207ENST00000566549 TBCELQ5QJ74 424 aa18.4■□□□□ 0.54
MSLN-207ENST00000566549 MPP7Q5T2T1 576 aa18.4■□□□□ 0.54
MSLN-207ENST00000566549 GPRC6AQ5T6X5 926 aa18.4■□□□□ 0.54
MSLN-207ENST00000566549 GRAMD4Q6IC98 578 aa18.4■□□□□ 0.54
MSLN-207ENST00000566549 DPY19L3Q6ZPD9 716 aa18.4■□□□□ 0.54
MSLN-207ENST00000566549 KIAA2013Q8IYS2 634 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms