RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 AKT1P31749 480 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 STAT5AP42229 794 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 NAP1L1P55209 391 aaKnown RBP17.93■□□□□ 0.46
USB1-213ENST00000566292 RWDD2BP57060 319 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 XIAPP98170 497 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 LONRF2Q1L5Z9 754 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 METRNLQ641Q3 311 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 OR13C4Q8NGS5 318 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 ZDHHC12Q96GR4 267 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 SPATA13Q96N96 652 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 FERMT1Q9BQL6 677 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 EFHD1Q9BUP0 239 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 ULBP3Q9BZM4 244 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 ADNPQ9H2P0 1102 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 ASB8Q9H765 288 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 SEMA5BQ9P283 1151 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 AAR2Q9Y312 384 aaKnown RBP17.93■□□□□ 0.46
USB1-213ENST00000566292 HEMK1Q9Y5R4 338 aaPredicted RBP17.93■□□□□ 0.46
USB1-213ENST00000566292 CFAP20Q9Y6A4 193 aaKnown RBP17.93■□□□□ 0.46
USB1-213ENST00000566292 PIKFYVEQ9Y2I7 2098 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 C5orf60A6NFR6 353 aa17.92■□□□□ 0.46
USB1-213ENST00000566292 SGTAO43765 313 aa17.92■□□□□ 0.46
USB1-213ENST00000566292 MTHFD1P11586 935 aaKnown RBP17.92■□□□□ 0.46
USB1-213ENST00000566292 NELFEP18615 380 aaKnown RBP17.92■□□□□ 0.46
USB1-213ENST00000566292 OAS2P29728 719 aaKnown RBP17.92■□□□□ 0.46
USB1-213ENST00000566292 POLE2P56282 527 aa17.92■□□□□ 0.46
USB1-213ENST00000566292 CDC20Q12834 499 aa17.92■□□□□ 0.46
USB1-213ENST00000566292 IL11RAQ14626 422 aa17.92■□□□□ 0.46
USB1-213ENST00000566292 DENND5AQ6IQ26 1287 aa17.92■□□□□ 0.46
USB1-213ENST00000566292 ESX1Q8N693 406 aa17.92■□□□□ 0.46
USB1-213ENST00000566292 ELMO2Q96JJ3 720 aa17.92■□□□□ 0.46
USB1-213ENST00000566292 ZNF514Q96K75 400 aaPredicted RBP17.92■□□□□ 0.46
USB1-213ENST00000566292 CATSPER2Q96P56 530 aa17.92■□□□□ 0.46
USB1-213ENST00000566292 INSM2Q96T92 566 aaPredicted RBP17.92■□□□□ 0.46
USB1-213ENST00000566292 WWP1Q9H0M0 922 aa17.92■□□□□ 0.46
USB1-213ENST00000566292 SLC25A18Q9H1K4 315 aa17.92■□□□□ 0.46
USB1-213ENST00000566292 IMP3Q9NV31 184 aaKnown RBP17.92■□□□□ 0.46
USB1-213ENST00000566292 MRPS18BQ9Y676 258 aaKnown RBP17.92■□□□□ 0.46
USB1-213ENST00000566292 RPS6KL1Q9Y6S9 549 aa17.92■□□□□ 0.46
USB1-213ENST00000566292 IGHV5-51A0A0C4DH38 117 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 MGAT4DA6NG13 374 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 AGAP14A8MT82 685 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 TJP3O95049 919 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 IPO7O95373 1038 aaKnown RBP17.91■□□□□ 0.46
USB1-213ENST00000566292 FGF5P12034 268 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 VAV2P52735 878 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 ZNF140P52738 457 aaPredicted RBP17.91■□□□□ 0.46
USB1-213ENST00000566292 SPARCL1Q14515 664 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 PRPSAP1Q14558 356 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 DUS1LQ6P1R4 473 aaKnown RBP17.91■□□□□ 0.46
USB1-213ENST00000566292 MICALCLQ6ZW33 695 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 KLHDC8BQ8IXV7 354 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 GALNT6Q8NCL4 622 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 OR2L2Q8NH16 312 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 STARD8Q92502 1023 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 TBL1YQ9BQ87 522 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 TRIM4Q9C037 500 aa17.91■□□□□ 0.46
USB1-213ENST00000566292 GOLGA6L3A6NEY3 463 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 SUV39H1O43463 412 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 SPAG6O75602 509 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 STK10O94804 968 aaKnown RBP17.9■□□□□ 0.46
USB1-213ENST00000566292 KIAA0754O94854 1291 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 CCR10P46092 362 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 TMPRSS15P98073 1019 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 KCNAB2Q13303 367 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 PLCL1Q15111 1095 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 BCL7AQ4VC05 210 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 ATP1A1-AS1Q5TC04 95 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 C6orf15Q6UXA7 325 aaPredicted RBP17.9■□□□□ 0.46
USB1-213ENST00000566292 RASGRP3Q8IV61 690 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 LILRA3Q8N6C8 439 aaPredicted RBP17.9■□□□□ 0.46
USB1-213ENST00000566292 SPDYE1Q8NFV5 336 aaPredicted RBP17.9■□□□□ 0.46
USB1-213ENST00000566292 SLC41A2Q96JW4 573 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 LINC00615Q96LM1 132 aaPredicted RBP17.9■□□□□ 0.46
USB1-213ENST00000566292 C12orf66Q96MD2 445 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 MAP3K3Q99759 626 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 FAM96AQ9H5X1 160 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 ARNT2Q9HBZ2 717 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 FAM8A1Q9UBU6 413 aa17.9■□□□□ 0.46
USB1-213ENST00000566292 A0A0U1RQJ8 604 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 CCL22O00626 93 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 TERTO14746 1132 aaKnown RBP17.89■□□□□ 0.45
USB1-213ENST00000566292 LDB2O43679 373 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 WISP1O95388 367 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 TIAF1O95411 115 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 CRTAMO95727 393 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 FOLR1P15328 257 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 CETN2P41208 172 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 KCNAB1Q14722 419 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.89■□□□□ 0.45
USB1-213ENST00000566292 KCTD11Q693B1 232 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 C16orf46Q6P387 395 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 KLHL35Q6PF15 583 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 CERS6Q6ZMG9 384 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 TMEM139Q8IV31 216 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 NXPE1Q8N323 547 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 UBXN4Q92575 508 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 RMDN2Q96LZ7 410 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 CRLS1Q9UJA2 301 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 TUBD1Q9UJT1 453 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms