RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SFNP31947 248 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 MLLT3P42568 568 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 PPP4CP60510 307 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 UBXN2AP68543 259 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 STARD3Q14849 445 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SPATS1Q496A3 300 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CADM2Q8N3J6 435 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ZFP41Q8N8Y5 198 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 KCT2Q8NC54 265 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 OR13J1Q8NGT2 312 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CANT1Q8WVQ1 401 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ADPGKQ9BRR6 497 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 IER2Q9BTL4 223 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 WDR11Q9BZH6 1224 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 TGIF2Q9GZN2 237 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ATG10Q9H0Y0 220 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 PCDHAC1Q9H158 963 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 APOBEC3GQ9HC16 384 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 UCKL1Q9NWZ5 548 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 TNFRSF10DQ9UBN6 386 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 KLHL21Q9UJP4 597 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ELF5Q9UKW6 265 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 OGDHLQ9ULD0 1010 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 KRT87PA6NCN2 255 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 KPNA7A9QM74 516 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 GNGT2O14610 69 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SNAP29O95721 258 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ADORA3P0DMS8 318 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ENO3P13929 434 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 CFL1P23528 166 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 IL1R2P27930 398 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 POLR2JP52435 117 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 PLA2G16P53816 162 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 EEFSECP57772 596 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 CNTN2Q02246 1040 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SLC25A11Q02978 314 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 ELAVL2Q12926 359 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 SQLEQ14534 574 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 PDK2Q15119 407 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 NEDD8Q15843 81 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 PLEKHG6Q3KR16 790 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ATF7IP2Q5U623 682 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 TMEM198Q66K66 360 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 DARS2Q6PI48 645 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 UNQ6126/PRO20091Q6UXV3 157 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 EFL1Q7Z2Z2 1120 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 ZNF671Q8TAW3 534 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SEPT5Q99719 369 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 PDGFDQ9GZP0 370 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 TOGARAM1Q9Y4F4 1720 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CNTNAP1P78357 1384 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 KCNU1A8MYU2 1149 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 INPPL1O15357 1258 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CHRNA1P02708 482 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 IRF1P10914 325 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 IL7RP16871 459 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 UQCRC1P31930 480 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 FADDQ13158 208 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 IRF3Q14653 427 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 TRIP4Q15650 581 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 CTU2Q2VPK5 515 aaKnown RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 SLFN12LQ6IEE8 588 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CYP20A1Q6UW02 462 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 FGD2Q7Z6J4 655 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 THNSL1Q8IYQ7 743 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 KRT78Q8N1N4 520 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 COPS9Q8WXC6 57 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 SLC38A4Q969I6 547 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 ACSF2Q96CM8 615 aaPredicted RBP2.89□□□□□ -1.95
CHD9-218ENST00000566029 MUC13Q9H3R2 512 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 IFT22Q9H7X7 185 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 KLHL11Q9NVR0 708 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CD274Q9NZQ7 290 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CACFD1Q9UGQ2 172 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 CNTN6Q9UQ52 1028 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 RNF24Q9Y225 148 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 PCDHGB6Q9Y5F9 930 aa2.89□□□□□ -1.95
CHD9-218ENST00000566029 C4AP0C0L4 1744 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 C4BP0C0L5 1744 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 J3QR89 54 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 FZD6O60353 706 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 VNN2O95498 520 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SERPINA3P01011 423 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 PGK2P07205 417 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 EVI2BP34910 448 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 HTR2BP41595 481 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 MASP1P48740 699 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NOMO1Q15155 1222 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 KCNT1Q5JUK3 1230 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TTC23Q5W5X9 447 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 DENND5AQ6IQ26 1287 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 DCUN1D2Q6PH85 259 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 PLEKHM3Q6ZWE6 761 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 RFKQ969G6 155 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 RADILQ96JH8 1075 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 FAM129BQ96TA1 746 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ELF4Q99607 663 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 SLC6A15Q9H2J7 730 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 KAT8Q9H7Z6 458 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms