RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 RNF19BQ6ZMZ0 732 aa13.46□□□□□ -0.25
CX3CL1-204ENST00000565912 PLD5Q8N7P1 536 aa13.46□□□□□ -0.25
CX3CL1-204ENST00000565912 OR2T34Q8NGX1 318 aa13.46□□□□□ -0.25
CX3CL1-204ENST00000565912 OR2T3Q8NH03 318 aa13.46□□□□□ -0.25
CX3CL1-204ENST00000565912 ABI3Q9P2A4 366 aa13.46□□□□□ -0.25
CX3CL1-204ENST00000565912 INSIG1O15503 277 aa13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 ALOX5P09917 674 aa13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 SDC2P34741 201 aa13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 PGDP52209 483 aa13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 SLC13A2Q13183 592 aa13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 FAM110CQ1W6H9 321 aa13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 SLC5A9Q2M3M2 681 aa13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 PIGXQ8TBF5 258 aa13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 IRGQQ8WZA9 623 aa13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 RBM4BQ9BQ04 359 aaKnown RBP13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 RBM4Q9BWF3 364 aaKnown RBP13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 R3HDM2Q9Y2K5 976 aaKnown RBP13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 GRIP1Q9Y3R0 1128 aa13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 CPQQ9Y646 472 aa13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 COMMD3-BMI1R4GMX3 469 aa13.46□□□□□ -0.26
CX3CL1-204ENST00000565912 MT-ND1P03886 318 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 CEBPGP53567 150 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 SLC8B1Q6J4K2 584 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 ANKRD46Q86W74 232 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 PHC3Q8NDX5 983 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 KLK6Q92876 244 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 RPL10LQ96L21 214 aaKnown RBP13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 HBEGFQ99075 208 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 SRMSQ9H3Y6 488 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 PDZD7Q9H5P4 517 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 A0A1B0GVM2 712 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 EME2A4GXA9 379 aaPredicted RBP13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 FAM172BPA6NC97 362 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 TCAF2A6NFQ2 919 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 BTBD19C9JJ37 291 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 BMP6P22004 513 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 AHCYP23526 432 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 LIPEQ05469 1076 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 LIX1Q8N485 282 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 DIRAS2Q96HU8 199 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 KLHL32Q96NJ5 620 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 ERVK-5Q9HDB9 667 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 ZNF208O43345 1280 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 GOT2P00505 430 aaKnown RBP13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 SMARCD3Q6STE5 483 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 ADGRG6Q86SQ4 1221 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 SIDT2Q8NBJ9 832 aaKnown RBP13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 C11orf65Q8NCR3 313 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 ARNTL2Q8WYA1 636 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 HTRA1Q92743 480 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 DPEP3Q9H4B8 488 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 TCAF1Q9Y4C2 921 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 SNX10Q9Y5X0 201 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 EFNA1P20827 205 aaPredicted RBP13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 CTSOP43234 321 aaPredicted RBP13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 CCR10P46092 362 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 PPP3R1P63098 170 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 PLET1Q6UQ28 207 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 ANKRD23Q86SG2 305 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 RANBP3LQ86VV4 465 aaPredicted RBP13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 ARL10Q8N8L6 244 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 SPATA9Q9BWV2 254 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 WDR12Q9GZL7 423 aaKnown RBP13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 MED31Q9Y3C7 131 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 TSPAN1O60635 241 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 AP2A1O95782 977 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 CCNE2O96020 404 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 THRBP10828 461 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 RPL17P18621 184 aaKnown RBP13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 DGKGP49619 791 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 PRR5P85299 388 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 VWA5B1Q5TIE3 1220 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 THAP5Q7Z6K1 395 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 PYROXD2Q8N2H3 581 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 GTPBP3Q969Y2 492 aaKnown RBP13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 HIST1H2AAQ96QV6 131 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 DGKBQ9Y6T7 804 aa13.45□□□□□ -0.26
CX3CL1-204ENST00000565912 POU2F1P14859 743 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 CCR3P51677 355 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 CDH12P55289 794 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 PPIGQ13427 754 aaKnown RBP eCLIP13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 CRELD2Q6UXH1 353 aaPredicted RBP13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 ZYG11AQ6WRX3 759 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 GIPC3Q8TF64 312 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 LPGAT1Q92604 370 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 MARCH7Q9H992 704 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 MRPS17Q9Y2R5 130 aaKnown RBP13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 GRIN2DO15399 1336 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 FAM149AA5PLN7 773 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 PLK4O00444 970 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 PSMA1P25786 263 aaKnown RBP13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 DDX6P26196 483 aaKnown RBP eCLIP13.44□□□□□ -0.265e-6■■■■□ 21.1
CX3CL1-204ENST00000565912 VARSP26640 1264 aaKnown RBP13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 VBP1P61758 197 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 TLR1Q15399 786 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 CCSAPQ6IQ19 270 aaPredicted RBP13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 MFSD3Q96ES6 412 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 SLC25A51Q9H1U9 297 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 ALG2Q9H553 416 aa13.44□□□□□ -0.26
CX3CL1-204ENST00000565912 MCCC2Q9HCC0 563 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms