RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ANKRD6Q9Y2G4 727 aa10.93□□□□□ -0.66
SF3B3-205ENST00000564899 MED16Q9Y2X0 877 aa10.93□□□□□ -0.66
SF3B3-205ENST00000564899 OAS3Q9Y6K5 1087 aaKnown RBP10.93□□□□□ -0.66
SF3B3-205ENST00000564899 A0A087X1B8 175 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 SPAARA0A1B0GVQ0 90 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 TMEM120BA0PK00 339 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 C10orf142B7Z368 130 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 QSOX1O00391 747 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 FPGTO14772 594 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 PRPF4O43172 522 aaKnown RBP eCLIP10.92□□□□□ -0.66
SF3B3-205ENST00000564899 TYROBPO43914 113 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 GLRA3O75311 464 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 TRIM16O95361 564 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 ASMTLO95671 621 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 CAPNS1P04632 268 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 IGHV4-34P06331 123 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 CD9P21926 228 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 TRIM23P36406 574 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 NUDT1P36639 197 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 GMPRP36959 345 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 IRF9Q00978 393 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 TIAL1Q01085 375 aaKnown RBP eCLIP10.92□□□□□ -0.66
SF3B3-205ENST00000564899 PPARDQ03181 441 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 TMEM115Q12893 351 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-205ENST00000564899 UAP1L1Q3KQV9 507 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 USP39Q53GS9 565 aaKnown RBP10.92□□□□□ -0.66
SF3B3-205ENST00000564899 UGT3A1Q6NUS8 523 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 DOK6Q6PKX4 331 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 CCDC91Q7Z6B0 441 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 ADGRG6Q86SQ4 1221 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 TBC1D1Q86TI0 1168 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-205ENST00000564899 ARFGAP2Q8N6H7 521 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 ANKRD42Q8N9B4 389 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 RASGEF1AQ8N9B8 481 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 SIDT2Q8NBJ9 832 aaKnown RBP10.92□□□□□ -0.66
SF3B3-205ENST00000564899 SNX19Q92543 992 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 FUBP1Q96AE4 644 aaKnown RBP10.92□□□□□ -0.66
SF3B3-205ENST00000564899 SGF29Q96ES7 293 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 TSNARE1Q96NA8 513 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 PANX3Q96QZ0 392 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 TSSK1BQ9BXA7 367 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 OR2AG1Q9H205 316 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 CNOT10Q9H9A5 744 aaKnown RBP10.92□□□□□ -0.66
SF3B3-205ENST00000564899 TRIM39Q9HCM9 518 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 OGFRQ9NZT2 677 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 DMTF1Q9Y222 760 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 ACOT9Q9Y305 439 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 OR1A2Q9Y585 309 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 ADAMTS20P59510 1910 aa10.92□□□□□ -0.66
SF3B3-205ENST00000564899 NUMA1Q14980 2115 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 TNRC6BQ9UPQ9 1833 aaKnown RBP10.91□□□□□ -0.66
SF3B3-205ENST00000564899 OR2AG2A6NM03 316 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 CACNB4O00305 520 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-205ENST00000564899 POLR3GO15318 223 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-205ENST00000564899 VEGFDO43915 354 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 DNAJC6O75061 913 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 CDK14O94921 469 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 WISP3O95389 354 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-205ENST00000564899 FTH1P02794 183 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 GSTA1P08263 222 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 COL6A2P12110 1019 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 MYCLP1P12525 358 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-205ENST00000564899 ZNF37AP17032 561 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-205ENST00000564899 ZNF8P17098 575 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-205ENST00000564899 CRHR1P34998 444 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 SKIV2L2P42285 1042 aaKnown RBP10.91□□□□□ -0.66
SF3B3-205ENST00000564899 CCT5P48643 541 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 PRLHRP49683 370 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 ATP1A2P50993 1020 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 CLCN7P51798 805 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 CTSCP53634 463 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 CLDN2P57739 230 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 RPL6Q02878 288 aaKnown RBP10.91□□□□□ -0.66
SF3B3-205ENST00000564899 BCL7AQ4VC05 210 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 SOWAHCQ53LP3 525 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-205ENST00000564899 PMS2CLQ68D20 193 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 TMEM220Q6QAJ8 160 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 C19orf48Q6RUI8 117 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 PAQR3Q6TCH7 311 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 SLC36A4Q6YBV0 504 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 CDHR3Q6ZTQ4 885 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 CLEC14AQ86T13 490 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 TRAPPC5Q8IUR0 188 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 SPNS2Q8IVW8 549 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 GIMAP7Q8NHV1 300 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 CD200R1Q8TD46 325 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 TCP10LQ8TDR4 215 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 KCTD4Q8WVF5 259 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 FOXJ1Q92949 421 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 BIRC7Q96CA5 298 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 SLC30A3Q99726 388 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 APOOQ9BUR5 198 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 LGR4Q9BXB1 951 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 PCED1AQ9H1Q7 454 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 EBF2Q9HAK2 575 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 SYTL2Q9HCH5 934 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 TMEM9BQ9NQ34 198 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 SPATS2LQ9NUQ6 558 aaKnown RBP10.91□□□□□ -0.66
SF3B3-205ENST00000564899 NKIRAS1Q9NYS0 192 aa10.91□□□□□ -0.66
SF3B3-205ENST00000564899 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms