RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 TRAPPC5Q8IUR0 188 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 KLHL6Q8WZ60 621 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 STARD8Q92502 1023 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 RSC1A1Q92681 617 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 LRRC45Q96CN5 670 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 CXorf40BQ96DE9 158 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 HES6Q96HZ4 224 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 TTC25Q96NG3 672 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 APOL2Q9BQE5 337 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 ULBP3Q9BZM4 244 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLN6-204ENST00000564752 RPS6KL1Q9Y6S9 549 aa18.13■□□□□ 0.49
CLN6-204ENST00000564752 GLYATL1P3A0A0U1RQE8 302 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 STX7O15400 261 aaKnown RBP18.12■□□□□ 0.49
CLN6-204ENST00000564752 UGT1A9O60656 530 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 RASSF9O75901 435 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 ZNF28P17035 718 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 UGT1A6P19224 532 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 UGT1A1P22309 533 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 UGT1A4P22310 534 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 F8A1P23610 371 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 OAS2P29728 719 aaKnown RBP18.12■□□□□ 0.49
CLN6-204ENST00000564752 KLF1Q13351 362 aaPredicted RBP18.12■□□□□ 0.49
CLN6-204ENST00000564752 CHRNA6Q15825 494 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 C6orf15Q6UXA7 325 aaPredicted RBP18.12■□□□□ 0.49
CLN6-204ENST00000564752 ARHGEF18Q6ZSZ5 1173 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 APOBEC4Q8WW27 367 aaKnown RBP18.12■□□□□ 0.49
CLN6-204ENST00000564752 ZDHHC12Q96GR4 267 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 OR6C1Q96RD1 312 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 ZCCHC2Q9C0B9 1178 aaKnown RBP18.12■□□□□ 0.49
CLN6-204ENST00000564752 RAB33BQ9H082 229 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 UGT1A7Q9HAW7 530 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 UGT1A10Q9HAW8 530 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 UGT1A8Q9HAW9 530 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 GUCA1BQ9UMX6 200 aa18.12■□□□□ 0.49
CLN6-204ENST00000564752 DNMT3AQ9Y6K1 912 aaPredicted RBP18.12■□□□□ 0.49
CLN6-204ENST00000564752 POP7O75817 140 aaKnown RBP18.11■□□□□ 0.49
CLN6-204ENST00000564752 FGF5P12034 268 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 TCN2P20062 427 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 CA5AP35218 305 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 ADRA1AP35348 466 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 TLE1Q04724 770 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 DMPKQ09013 629 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 OLIG2Q13516 323 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 ITGA9Q13797 1035 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 DEFB109BQ30KR1 87 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 LDLRAP1Q5SW96 308 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 SEL1L2Q5TEA6 688 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 CACHD1Q5VU97 1274 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 TMEM220Q6QAJ8 160 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 RANBP10Q6VN20 620 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 AMZ2Q86W34 360 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 RASGEF1AQ8N9B8 481 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 DDHD1Q8NEL9 900 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 SEMA5BQ9P283 1151 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 MRPS18BQ9Y676 258 aaKnown RBP18.11■□□□□ 0.49
CLN6-204ENST00000564752 ARL5AQ9Y689 179 aa18.11■□□□□ 0.49
CLN6-204ENST00000564752 GOLGA6L3A6NEY3 463 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 C5orf60A6NFR6 353 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 C2orf81A6NN90 581 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 GAPDHSO14556 408 aaPredicted RBP18.1■□□□□ 0.49
CLN6-204ENST00000564752 GPR39O43194 453 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 NELFEP18615 380 aaKnown RBP18.1■□□□□ 0.49
CLN6-204ENST00000564752 LPOP22079 712 aaPredicted RBP18.1■□□□□ 0.49
CLN6-204ENST00000564752 HALP42357 657 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 CTSCP53634 463 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 TAF1AQ15573 450 aaPredicted RBP18.1■□□□□ 0.49
CLN6-204ENST00000564752 ATP1A1-AS1Q5TC04 95 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 IRGCQ6NXR0 463 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 C16orf46Q6P387 395 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 FAM92BQ6ZTR7 304 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 RASGRP3Q8IV61 690 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 FAM71DQ8N9W8 422 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 GALNT6Q8NCL4 622 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 C9orf43Q8TAL5 461 aaPredicted RBP18.1■□□□□ 0.49
CLN6-204ENST00000564752 RNF31Q96EP0 1072 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 TBL1YQ9BQ87 522 aa18.1■□□□□ 0.49
CLN6-204ENST00000564752 R3HDM2Q9Y2K5 976 aaKnown RBP18.1■□□□□ 0.49
CLN6-204ENST00000564752 COL12A1Q99715 3063 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 TCRBV7S2A1N4TA0A589 114 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 SPAG6O75602 509 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 KIAA0754O94854 1291 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 PRAMEF1O95521 474 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 DLSTP36957 453 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 PTPRCAPQ14761 206 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 RPE65Q16518 533 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 SKIDA1Q1XH10 827 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.09■□□□□ 0.49
CLN6-204ENST00000564752 GPRC6AQ5T6X5 926 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 FAM83HQ6ZRV2 1179 aaPredicted RBP18.09■□□□□ 0.49
CLN6-204ENST00000564752 OR4K2Q8NGD2 314 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 SLC35B2Q8TB61 432 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 ABHD17AQ96GS6 310 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 ELMO2Q96JJ3 720 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 SLC41A2Q96JW4 573 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 ZNF71Q9NQZ8 489 aaPredicted RBP18.09■□□□□ 0.49
CLN6-204ENST00000564752 SMOXQ9NWM0 555 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 CROTQ9UKG9 612 aa18.09■□□□□ 0.49
CLN6-204ENST00000564752 CRTAMO95727 393 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 AKT1P31749 480 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms