RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 MAGEE1Q9HCI5 957 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 SLC25A13Q9UJS0 675 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 SCML2Q9UQR0 700 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 PTGDR2Q9Y5Y4 395 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 LRRC37AA6NMS7 1700 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 ANKRD31Q8N7Z5 1873 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 KRBA1A5PL33 1030 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 SYNDIG1LA6NDD5 238 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 SLC38A8A6NNN8 435 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 SDHDO14521 159 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 KCNH1O95259 989 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 GSNP06396 782 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 GNAO1P09471 354 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 MTHFD1P11586 935 aaKnown RBP10.33□□□□□ -0.76
RNF40-204ENST00000563683 SELPP16109 830 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 RPL10P27635 214 aaKnown RBP10.33□□□□□ -0.76
RNF40-204ENST00000563683 MAPKAPK2P49137 400 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 PRIM2P49643 509 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 HLCSP50747 726 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 POLR2JP52435 117 aaKnown RBP10.33□□□□□ -0.76
RNF40-204ENST00000563683 GLYATQ6IB77 296 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 ZC3H7AQ8IWR0 971 aaKnown RBP10.33□□□□□ -0.76
RNF40-204ENST00000563683 OFCC1Q8IZS5 231 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 CD99L2Q8TCZ2 262 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 MCOLN3Q8TDD5 553 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 SLC45A3Q96JT2 553 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 DGCR6LQ9BY27 220 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 WDR12Q9GZL7 423 aaKnown RBP10.33□□□□□ -0.76
RNF40-204ENST00000563683 TMEM181Q9P2C4 612 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 PHIPQ8WWQ0 1821 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 A0A1B0GVM2 712 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 MGAT4DA6NG13 374 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 CLDN25C9JDP6 229 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 PRAMEF1O95521 474 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 OTCP00480 354 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 CD247P20963 164 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 GABRB3P28472 473 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 GABRR2P28476 465 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 ZNF284Q2VY69 593 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 PM20D1Q6GTS8 502 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 TXNDC11Q6PKC3 985 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 CACUL1Q86Y37 369 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 MICU2Q8IYU8 434 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 LINC01465Q8N7H1 131 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 ARL14EPQ8N8R7 260 aaPredicted RBP10.33□□□□□ -0.76
RNF40-204ENST00000563683 ROPN1LQ96C74 230 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 NSUN5Q96P11 429 aaKnown RBP10.33□□□□□ -0.76
RNF40-204ENST00000563683 IL12RB2Q99665 862 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 ALG2Q9H553 416 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 KIAA1522Q9P206 1035 aaPredicted RBP10.33□□□□□ -0.76
RNF40-204ENST00000563683 COL4A5P29400 1685 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 PRR23AA6NEV1 266 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 CA12O43570 354 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 ITGBL1O95965 494 aaPredicted RBP10.32□□□□□ -0.76
RNF40-204ENST00000563683 OR56A5P0C7T3 313 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 CDH4P55283 916 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 BNIP2Q12982 314 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 DEFB115Q30KQ5 88 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 SLC2A7Q6PXP3 512 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 ITIH5Q86UX2 942 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 SYTL1Q8IYJ3 562 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 SFRP1Q8N474 314 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 CLDN19Q8N6F1 224 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 FEM1CQ96JP0 617 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 MROQ9BYG7 248 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 CACYBPQ9HB71 228 aaKnown RBP10.32□□□□□ -0.76
RNF40-204ENST00000563683 SMPD3Q9NY59 655 aaPredicted RBP10.32□□□□□ -0.76
RNF40-204ENST00000563683 MYO7AQ13402 2215 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 AQP9O43315 295 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 RASAL1O95294 804 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 PRSS56P0CW18 603 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 RAD23AP54725 363 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 IRF8Q02556 426 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 ZNF33AQ06730 810 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 NOGQ13253 232 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 MAD2L1Q13257 205 aaPredicted RBP10.32□□□□□ -0.76
RNF40-204ENST00000563683 BROXQ5VW32 411 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 C11orf96Q7Z7L8 435 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 SPNS2Q8IVW8 549 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 KDM1BQ8NB78 822 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 TPD52L3Q96J77 140 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 UGT2B28Q9BY64 529 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 GPR62Q9BZJ7 368 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 ATP13A3Q9H7F0 1226 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 GPN2Q9H9Y4 310 aaPredicted RBP10.32□□□□□ -0.76
RNF40-204ENST00000563683 MRPL17Q9NRX2 175 aaKnown RBP10.32□□□□□ -0.76
RNF40-204ENST00000563683 POLR3BQ9NW08 1133 aaPredicted RBP10.32□□□□□ -0.76
RNF40-204ENST00000563683 SCN3BQ9NY72 215 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 ACTL7AQ9Y615 435 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 GON4LQ3T8J9 2241 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 LY75O60449 1722 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 TMX2-CTNND1H3BSU7 103 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 MGEA5O60502 916 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 ZNF623O75123 536 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 ECI2O75521 394 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 ALPIP09923 528 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 CKBP12277 381 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 MSH3P20585 1137 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 OXA1LQ15070 435 aa10.32□□□□□ -0.76
RNF40-204ENST00000563683 ATP6AP1Q15904 470 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms