RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 BORCS6Q96GS4 357 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 SERAC1Q96JX3 654 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 TREM1Q9NP99 234 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 WWOXQ9NZC7 414 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 STX16-NPEPL1H3BU86 382 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 PRAMEF2O60811 474 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 LHCGRP22888 699 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 CYP2F1P24903 491 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 CHRNA5P30532 468 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 COQ5Q5HYK3 327 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 OVOS1Q6IE37 1185 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 PIAS4Q8N2W9 510 aaPredicted RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 HDDC3Q8N4P3 179 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 STAG3L4Q8TBR4 150 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 NELL1Q92832 810 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ZNF70Q9UC06 446 aaPredicted RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 MGAT4AQ9UM21 535 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 WWP2O00308 870 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 CD9P21926 228 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 CSTF2P33240 577 aaKnown RBP eCLIP6.19□□□□□ -1.42
CLK3-212ENST00000563418 RPL3P39023 403 aaKnown RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 GYG1P46976 350 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 DYNLL1P63167 89 aaKnown RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 ZYXQ15942 572 aaKnown RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 TTLL9Q3SXZ7 439 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 SETMARQ53H47 684 aaPredicted RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 FAM209AQ5JX71 171 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 KIAA1614Q5VZ46 1190 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ADGRF4Q8IZF3 695 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 TNS4Q8IZW8 715 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 GLB1L3Q8NCI6 653 aaPredicted RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 OR13F1Q8NGS4 319 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ZFAND1Q8TCF1 268 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 DNTTIP1Q9H147 329 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 DPEP3Q9H4B8 488 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 A8MV72 311 aaPredicted RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 ERVV-1B6SEH8 477 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 M0R036 132 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 RPS6KA4O75676 772 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 PAK4O96013 591 aaPredicted RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 DNAJA1P31689 397 aaKnown RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 GPX6P59796 221 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 C19orf57Q0VDD7 668 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 MPP2Q14168 576 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 FAM205BPQ63HN1 556 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 CFAP77Q6ZQR2 320 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 SMIM15Q7Z3B0 74 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ZNF366Q8N895 744 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 RPLP0P6Q8NHW5 317 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 THAP6Q8TBB0 222 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 CD101Q93033 1021 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 MCMBPQ9BTE3 642 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 SPASTQ9UBP0 616 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 MEMO1Q9Y316 297 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 AFDNP55196 1824 aaKnown RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 LCMT2O60294 686 aaKnown RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 CAMK2BQ13554 666 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 MFSD14BQ5SR56 506 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 IRAK1BP1Q5VVH5 260 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 METTL3Q86U44 580 aaKnown RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 SIAH1Q8IUQ4 282 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 RIT1Q92963 219 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ABCB9Q9NP78 766 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 MICAL3Q7RTP6 2002 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ANXA5P08758 320 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 PHKG2P15735 406 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 CDH11P55287 796 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 MTMR1Q13613 665 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ALG1LQ6GMV1 187 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ZFP90Q8TF47 636 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 RNF139Q8WU17 664 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 CPT1BQ92523 772 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 SHC3Q92529 594 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 NUDT15Q9NV35 164 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 TMEM39AQ9NV64 488 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 NDFIP2Q9NV92 336 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 OXSMQ9NWU1 459 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 TAS2R14Q9NYV8 317 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ZNF69Q9UC07 566 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 PET100P0DJ07 73 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 CPN2P22792 545 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 MPSTP25325 297 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 GBX2P52951 348 aaPredicted RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 ERVFC1P60507 584 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 SMARCB1Q12824 385 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 NWD1Q149M9 1564 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 TMEM236Q5W0B7 351 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 RHOUQ7L0Q8 258 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 SZRD1Q7Z422 152 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 C14orf80Q86SX3 495 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 Q8N402 240 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 SLC13A3Q8WWT9 602 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ACDQ96AP0 544 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 ASIC4Q96FT7 647 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 RUSC1Q9BVN2 902 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 POLR3FQ9H1D9 316 aaPredicted RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 RAD18Q9NS91 495 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 F5H6K3 240 aa6.19□□□□□ -1.42
CLK3-212ENST00000563418 IPO13O94829 963 aaKnown RBP6.19□□□□□ -1.42
CLK3-212ENST00000563418 ANXA8P13928 327 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms