RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 LAYNQ6UX15 382 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 MBOAT1Q6ZNC8 495 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 CELF5Q8N6W0 485 aaKnown RBP18.81■□□□□ 0.6
SMPD3-203ENST00000563226 DNAJC9Q8WXX5 260 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 NAF1Q96HR8 494 aaKnown RBP18.81■□□□□ 0.6
SMPD3-203ENST00000563226 TMEM79Q9BSE2 394 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 SLC25A23Q9BV35 468 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 PCDH12Q9NPG4 1184 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 PTBP2Q9UKA9 531 aaKnown RBP18.81■□□□□ 0.6
SMPD3-203ENST00000563226 ST14Q9Y5Y6 855 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 E7ENX8 843 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 SLC9A3R1O14745 358 aaPredicted RBP18.81■□□□□ 0.6
SMPD3-203ENST00000563226 MRASO14807 208 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 NRP2O60462 931 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 MTX2O75431 263 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 S100BP04271 92 aaPredicted RBP18.81■□□□□ 0.6
SMPD3-203ENST00000563226 TIMP2P16035 220 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 HTR6P50406 440 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 ATXN3P54252 364 aaPredicted RBP18.81■□□□□ 0.6
SMPD3-203ENST00000563226 POLR2LP62875 67 aaKnown RBP18.81■□□□□ 0.6
SMPD3-203ENST00000563226 GTF2H2Q13888 395 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 ARHGEF7Q14155 803 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 GTF2H2CQ6P1K8 395 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 KBTBD6Q86V97 674 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 RETREG3Q86VR2 466 aa18.81■□□□□ 0.6
SMPD3-203ENST00000563226 MTIF3Q9H2K0 278 aaKnown RBP18.81■□□□□ 0.6
SMPD3-203ENST00000563226 A0A1W2PQ67 120 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 H3BNX3 289 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 NR5A2O00482 541 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 VIPR1P32241 457 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 ARL1P40616 181 aaPredicted RBP18.8■□□□□ 0.6
SMPD3-203ENST00000563226 GDF5P43026 501 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 CREB5Q02930 508 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 MIER2Q8N344 545 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 GDPD5Q8WTR4 605 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 OSCP1Q8WVF1 389 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 ANKRD27Q96NW4 1050 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 EGFL8Q99944 293 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 SPATA16Q9BXB7 569 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 LATS2Q9NRM7 1088 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 PKD2L2Q9NZM6 624 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 IL36AQ9UHA7 158 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 SARDHQ9UL12 918 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 GIPC1O14908 333 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 CAPN1P07384 714 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 TCN1P20061 433 aaPredicted RBP18.8■□□□□ 0.6
SMPD3-203ENST00000563226 CAPN3P20807 821 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 ME2P23368 584 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 ETV3P41162 512 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 Q6ZVL8 140 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 OR4F6Q8NGB9 312 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 NXPE3Q969Y0 559 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 RSRC1Q96IZ7 334 aaKnown RBP18.8■□□□□ 0.6
SMPD3-203ENST00000563226 HBEGFQ99075 208 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 SLC39A3Q9BRY0 314 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 SDR39U1Q9NRG7 319 aaPredicted RBP18.8■□□□□ 0.6
SMPD3-203ENST00000563226 KCTD5Q9NXV2 234 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 ADA2Q9NZK5 511 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 ZMYM5Q9UJ78 669 aa18.8■□□□□ 0.6
SMPD3-203ENST00000563226 TNPO3Q9Y5L0 923 aaKnown RBP18.8■□□□□ 0.6
SMPD3-203ENST00000563226 TCF20Q9UGU0 1960 aaKnown RBP18.79■□□□□ 0.6
SMPD3-203ENST00000563226 TSPAN11A1L157 253 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 OTOL1A6NHN0 477 aaPredicted RBP18.79■□□□□ 0.6
SMPD3-203ENST00000563226 UPK3BL1B0FP48 263 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 UPK3BL2E5RIL1 263 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 VPS4BO75351 444 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 TULP3O75386 442 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 KATNA1O75449 491 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 CHEK2O96017 543 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 POU2F2P09086 479 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 NNMTP40261 264 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 TRAF3Q13114 568 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 FLOT2Q14254 428 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 OGFOD2Q6N063 350 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 SERPINA13PQ6UXR4 307 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 VN1R2Q8NFZ6 395 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 ULK4Q96C45 1275 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 RHBDF1Q96CC6 855 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 LRCH3Q96II8 777 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 IPPKQ9H8X2 491 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 GPR45Q9Y5Y3 372 aa18.79■□□□□ 0.6
SMPD3-203ENST00000563226 HOXC11O43248 304 aaPredicted RBP18.78■□□□□ 0.6
SMPD3-203ENST00000563226 CYP2A6P11509 494 aaPredicted RBP18.78■□□□□ 0.6
SMPD3-203ENST00000563226 VCLP18206 1134 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 ATP6V1C1P21283 382 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 SLC6A11P48066 632 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 RALGDSQ12967 914 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 CDC16Q13042 620 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 TTLL9Q3SXZ7 439 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 VPS26BQ4G0F5 336 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 FAM78AQ5JUQ0 283 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 ZDHHC20Q5W0Z9 365 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 C8orf82Q6P1X6 216 aaPredicted RBP18.78■□□□□ 0.6
SMPD3-203ENST00000563226 EFL1Q7Z2Z2 1120 aaKnown RBP18.78■□□□□ 0.6
SMPD3-203ENST00000563226 ADGRG6Q86SQ4 1221 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 DHDDSQ86SQ9 333 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 TEX37Q96LM6 180 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 C1orf50Q9BV19 199 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 EBF3Q9H4W6 596 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 WWOXQ9NZC7 414 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms