RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 COPG2Q9UBF2 871 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 NENFQ9UMX5 172 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 STON1Q9Y6Q2 735 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 ZHX2Q9Y6X8 837 aa3.74□□□□□ -1.81
HERC1-215ENST00000561436 ATXN2Q99700 1313 aaKnown RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 LRRC37AA6NMS7 1700 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 KANSL1LA0AUZ9 987 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 B4DGG1 531 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 VCYO14598 125 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 OGG1O15527 345 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 CIAO1O76071 339 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 TPPPO94811 219 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 OR2C1O95371 312 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 VNN2O95498 520 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 FGF2P09038 288 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 AKR1B1P15121 316 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 MAOAP21397 527 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 UBA1P22314 1058 aaKnown RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 PON1P27169 355 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 C21orf33P30042 268 aaPredicted RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 STX2P32856 288 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 THPOP40225 353 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 MATR3P43243 847 aaKnown RBP eCLIP3.73□□□□□ -1.81
HERC1-215ENST00000561436 GYG1P46976 350 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 RFX2P48378 723 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 NRIP1P48552 1158 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 RRP1P56182 461 aaKnown RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 TAS2R40P59535 323 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 CCNA1P78396 465 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 PRPF4BQ13523 1007 aaKnown RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 LAMB3Q13751 1172 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 MYBPC2Q14324 1141 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 PNLIPRP3Q17RR3 467 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 EFHC1Q5JVL4 640 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 FNBP1LQ5T0N5 605 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 DAB2IPQ5VWQ8 1189 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 KCTD18Q6PI47 426 aaPredicted RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 C16orf54Q6UWD8 224 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 Q6ZSV7 163 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 DPPA4Q7L190 304 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 KRT74Q7RTS7 529 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 PRPF39Q86UA1 669 aaKnown RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 TICAM2Q86XR7 235 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 SPATA6LQ8N4H0 392 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 APPL2Q8NEU8 664 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 GPRC5AQ8NFJ5 357 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 OR14A16Q8NHC5 309 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 GPT2Q8TD30 523 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 TXNDC15Q96J42 360 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 ACOX2Q99424 681 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 KXD1Q9BQD3 176 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 SLF1Q9BQI6 1058 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 WACQ9BTA9 647 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 MRPL1Q9BYD6 325 aaKnown RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 FAM234AQ9H0X4 552 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 OSGEPL1Q9H4B0 414 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 CLK4Q9HAZ1 481 aaKnown RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 MKKSQ9NPJ1 570 aaPredicted RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 DDX4Q9NQI0 724 aaKnown RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 SLC35C2Q9NQQ7 365 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 PSD3Q9NYI0 1048 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 NRBP1Q9UHY1 535 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 CDC14AQ9UNH5 594 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 PPIEQ9UNP9 301 aaKnown RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 CMAHPQ9Y471 501 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 PCDHAC2Q9Y5I4 1007 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 RAI2Q9Y5P3 530 aa3.73□□□□□ -1.81
HERC1-215ENST00000561436 SIPA1L3O60292 1781 aaPredicted RBP3.73□□□□□ -1.81
HERC1-215ENST00000561436 GAKO14976 1311 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 PDE4DIPQ5VU43 2346 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 UNC79Q9P2D8 2635 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 IGHV4-28A0A0C4DH34 117 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 MYMKA6NI61 221 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 FAM90A8PA6NJQ4 464 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 A8MV72 311 aaPredicted RBP3.72□□□□□ -1.81
HERC1-215ENST00000561436 H3BQ06 376 aaPredicted RBP3.72□□□□□ -1.81
HERC1-215ENST00000561436 DNM1LO00429 736 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 SERPINI2O75830 405 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 CH25HO95992 272 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 CRYABP02511 175 aaKnown RBP3.72□□□□□ -1.81
HERC1-215ENST00000561436 HOXC6P09630 235 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 FAM90A13PP0C7W8 464 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 FAM90A24PP0C7X0 464 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 PIGAP37287 484 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 CLCN3P51790 818 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 PGGT1BP53609 377 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 POLGP54098 1239 aaPredicted RBP3.72□□□□□ -1.81
HERC1-215ENST00000561436 CSNK2A1P68400 391 aaPredicted RBP3.72□□□□□ -1.81
HERC1-215ENST00000561436 GSTO1P78417 241 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 FOXM1Q08050 763 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 GRIK2Q13002 908 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 MAD2L1Q13257 205 aaPredicted RBP3.72□□□□□ -1.81
HERC1-215ENST00000561436 KCNC3Q14003 757 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 CTTNQ14247 550 aaKnown RBP3.72□□□□□ -1.81
HERC1-215ENST00000561436 CDONQ4KMG0 1287 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 MFSD14CQ5VZR4 134 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 KIAA0930Q6ICG6 404 aaPredicted RBP3.72□□□□□ -1.81
HERC1-215ENST00000561436 NAA16Q6N069 864 aaPredicted RBP3.72□□□□□ -1.81
HERC1-215ENST00000561436 CDC42EP5Q6NZY7 148 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 CRELD2Q6UXH1 353 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms