RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431		A0A0G2JPF8	293 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431		A0A1W2PRG0	241 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	ARHGAP10	A1A4S6	786 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	GAGE10	A6NGK3	116 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	FOXO6	A8MYZ6	492 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	HNRNPCL3	B7ZW38	293 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431		K7EPI3	171 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	KIR2DS3	K7RE56	304 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	SGK1	O00141	431 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	GPAA1	O43292	621 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	SYNCRIP	O60506	623 aa	Known RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	KERA	O60938	352 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	DAB1	O75553	588 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	TSPAN9	O75954	239 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLU7	O95391	586 aa	Known RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	LATS1	O95835	1130 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	UROD	P06132	367 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZFY	P08048	801 aa	Predicted RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	HNRNPCL4	P0DMR1	293 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	COX7A2	P14406	83 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMEM11	P17152	192 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	IL10	P22301	178 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	KCNA5	P22460	613 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	TBXAS1	P24557	533 aa	Predicted RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	ATP5O	P48047	213 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	HARS2	P49590	506 aa	Known RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	STARD6	P59095	220 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	YWHAZ	P63104	245 aa	Known RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	CCNA1	P78396	465 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	EFNB1	P98172	346 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	REL	Q04864	619 aa	Predicted RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	ACTN3	Q08043	901 aa	Predicted RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	DAZAP2	Q15038	168 aa	Predicted RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	TRIP6	Q15654	476 aa	Known RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	TST	Q16762	297 aa	Known RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	KRTAP5-11	Q6L8G4	156 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZSCAN25	Q6NSZ9	544 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	DCLRE1A	Q6PJP8	1040 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMTC3	Q6ZXV5	915 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	PRSS45	Q7RTY3	260 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLC25A41	Q8N5S1	370 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	NANOGP1	Q8N7R0	232 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	SPERT	Q8NA61	448 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	KCTD6	Q8NC69	237 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	ANKRD20A12P	Q8NF67	263 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	RASSF8	Q8NHQ8	419 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	NFKBID	Q8NI38	313 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	ACER1	Q8TDN7	264 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	FAM216A	Q8WUB2	273 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	ATOH1	Q92858	354 aa	Predicted RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	ATP6V0A1	Q93050	837 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	EME1	Q96AY2	570 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	C8orf76	Q96K31	380 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	C12orf42	Q96LP6	360 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	RUNDC3B	Q96NL0	473 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	MMTAG2	Q9BU76	263 aa	Known RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	RABEP2	Q9H5N1	569 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	THSD1	Q9NS62	852 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	TAS2R3	Q9NYW6	316 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	GRHL1	Q9NZI5	618 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	HDAC6	Q9UBN7	1215 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	FBXO40	Q9UH90	709 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	AGO2	Q9UKV8	859 aa	Known RBP	4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMEM5	Q9Y2B1	443 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	AP1M2	Q9Y6Q5	423 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	PARP14	Q460N5	1801 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	RLF	Q13129	1914 aa		4.13	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZNF236	Q9UL36	1845 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	TYW5	A2RUC4	315 aa	Known RBP	4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	KRT87P	A6NCN2	255 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	PSMA7	O14818	248 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	IKBKB	O14920	756 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SMPD2	O60906	423 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	TBX10	O75333	385 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	CNMD	O75829	334 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLITRK3	O94933	977 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	MLYCD	O95822	493 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SCGB1D1	O95968	90 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	F9	P00740	461 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	ADA	P00813	363 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SPARC	P09486	303 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	ACADM	P11310	421 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLC2A4	P14672	509 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	HOXD9	P28356	352 aa	Predicted RBP	4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	MAPK4	P31152	587 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	FMO4	P31512	558 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SOX6	P35712	828 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	NNMT	P40261	264 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	ARL1	P40616	181 aa	Predicted RBP	4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	DPP6	P42658	865 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	MATR3	P43243	847 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	ABCG1	P45844	678 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	RAD23A	P54725	363 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	ARSF	P54793	590 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLC12A3	P55017	1021 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	CTAG1A	P78358	180 aa		4.12	□□□□□ -1.75

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