RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CORO1CQ9ULV4 474 aaPredicted RBP10.52□□□□□ -0.73
TPM1-229ENST00000561242 PSMD13Q9UNM6 376 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 ASF1AQ9Y294 204 aa10.52□□□□□ -0.73
TPM1-229ENST00000561242 TRBV5-4A0A0C4DH59 114 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 ESYT3A0FGR9 886 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 EME2A4GXA9 379 aaPredicted RBP10.51□□□□□ -0.73
TPM1-229ENST00000561242 ZNF839A8K0R7 811 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 HIST1H2AGP0C0S8 130 aaPredicted RBP10.51□□□□□ -0.73
TPM1-229ENST00000561242 HIST1H2ADP20671 130 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 RPS3P23396 243 aaKnown RBP eCLIP10.51□□□□□ -0.73
TPM1-229ENST00000561242 ACP1P24666 158 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 SPRP35270 261 aaPredicted RBP10.51□□□□□ -0.73
TPM1-229ENST00000561242 CDKN1CP49918 316 aaPredicted RBP10.51□□□□□ -0.73
TPM1-229ENST00000561242 CTSCP53634 463 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 GPLD1P80108 840 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 FOXC1Q12948 553 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 DNAJC3Q13217 504 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 CTBP1Q13363 440 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 MSLNQ13421 630 aaPredicted RBP10.51□□□□□ -0.73
TPM1-229ENST00000561242 NFE2L1Q14494 772 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 AGAP9Q5VTM2 703 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 CYB5D1Q6P9G0 228 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 WASH2PQ6VEQ5 465 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 UNC5AQ6ZN44 842 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 RBM44Q6ZP01 1051 aaKnown RBP10.51□□□□□ -0.73
TPM1-229ENST00000561242 ERMP1Q7Z2K6 904 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 STRA8Q7Z7C7 330 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 GLRX5Q86SX6 157 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 LDB1Q86U70 411 aaPredicted RBP10.51□□□□□ -0.73
TPM1-229ENST00000561242 SLC26A11Q86WA9 606 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 CILP2Q8IUL8 1156 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 KYQ8NBH2 561 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 PHC3Q8NDX5 983 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 FBXO25Q8TCJ0 367 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 ZFPM2Q8WW38 1151 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.51□□□□□ -0.73
TPM1-229ENST00000561242 ZDHHC12Q96GR4 267 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 ELMO2Q96JJ3 720 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 HIST1H2AHQ96KK5 128 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 HIST1H2AJQ99878 128 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 CCDC3Q9BQI4 270 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 H2AFJQ9BTM1 129 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 WWP1Q9H0M0 922 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 MVB12BQ9H7P6 319 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 SYTL2Q9HCH5 934 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 WASH6PQ9NQA3 447 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 FBXO6Q9NRD1 293 aaPredicted RBP10.51□□□□□ -0.73
TPM1-229ENST00000561242 DLL3Q9NYJ7 618 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 CPNE7Q9UBL6 633 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 TBC1D29Q9UFV1 150 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 BTBD3Q9Y2F9 522 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 TDRKHQ9Y2W6 561 aaKnown RBP10.51□□□□□ -0.73
TPM1-229ENST00000561242 ZNF318Q5VUA4 2279 aa10.51□□□□□ -0.73
TPM1-229ENST00000561242 SHROOM3Q8TF72 1996 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 CUL9Q8IWT3 2517 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 A0A0C4DFX4 3053 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 AGAP14A8MT82 685 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 GPR39O43194 453 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 ZBTB14O43829 449 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 OR1I1O60431 355 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 RPLP0P05388 317 aaKnown RBP10.5□□□□□ -0.73
TPM1-229ENST00000561242 INHBAP08476 426 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 XRCC1P18887 633 aaPredicted RBP10.5□□□□□ -0.73
TPM1-229ENST00000561242 PSMA3P25788 255 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 IVDP26440 423 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 MAZP56270 477 aaKnown RBP10.5□□□□□ -0.73
TPM1-229ENST00000561242 DMPKQ09013 629 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 ABRQ12979 859 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 NAB1Q13506 487 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 CLPPQ16740 277 aaPredicted RBP10.5□□□□□ -0.73
TPM1-229ENST00000561242 KCTD19Q17RG1 926 aaPredicted RBP10.5□□□□□ -0.73
TPM1-229ENST00000561242 KLHL38Q2WGJ6 581 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 PROX2Q3B8N5 592 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 PLEKHS1Q5SXH7 462 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 METRNLQ641Q3 311 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 FAM45BPQ6NSW5 357 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 OGFOD3Q6PK18 319 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 ABRAXAS1Q6UWZ7 409 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 RAPH1Q70E73 1250 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 ZNF534Q76KX8 674 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 TMPRSS12Q86WS5 348 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 PLXDC1Q8IUK5 500 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 SLC35F3Q8IY50 421 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 PIANPQ8IYJ0 282 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 ABCA7Q8IZY2 2146 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 MYO1HQ8N1T3 1032 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 ZBTB2Q8N680 514 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 PPM1NQ8N819 430 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 NOA1Q8NC60 698 aaKnown RBP10.5□□□□□ -0.73
TPM1-229ENST00000561242 FAM45AQ8TCE6 357 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 LCN9Q8WX39 176 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 NCSTNQ92542 709 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 TFGQ92734 400 aaPredicted RBP10.5□□□□□ -0.73
TPM1-229ENST00000561242 N4BP2L2Q92802 583 aaPredicted RBP10.5□□□□□ -0.73
TPM1-229ENST00000561242 INPP5DQ92835 1189 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 CCDC74AQ96AQ1 378 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 GRAMD1AQ96CP6 724 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 C9orf72Q96LT7 481 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 FCRL3Q96P31 734 aaPredicted RBP10.5□□□□□ -0.73
TPM1-229ENST00000561242 CYTH2Q99418 400 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms