RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PPP1R7Q15435 360 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 CAPRIN2Q6IMN6 1127 aaKnown RBP14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 CERS6Q6ZMG9 384 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 TMEM26Q6ZUK4 368 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 PIM3Q86V86 326 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 PROSER1Q86XN7 944 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 KLHL7Q8IXQ5 586 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 PPIL6Q8IXY8 311 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 AVL9Q8NBF6 648 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 SPDYE1Q8NFV5 336 aaPredicted RBP14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 HM13Q8TCT9 377 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 ZCCHC14Q8WYQ9 949 aaKnown RBP14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 NXPE2Q96DL1 559 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 SIGLEC10Q96LC7 697 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 TMEM74Q96NL1 305 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 FCRL3Q96P31 734 aaPredicted RBP14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 INSM2Q96T92 566 aaPredicted RBP14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 CCM2Q9BSQ5 444 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 TBC1D10AQ9BXI6 508 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 POLR1BQ9H9Y6 1135 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 OGFRQ9NZT2 677 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 ACSL5Q9ULC5 683 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 PSMD13Q9UNM6 376 aa14.96□□□□□ -0.01
SNRPA1-213ENST00000560856 SDR42E2A6NKP2 422 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 TP73O15350 636 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 DXOO77932 396 aaKnown RBP14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 VIPP01282 170 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 CASQ1P31415 396 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 EPHA4P54764 986 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 LYPLAL1Q5VWZ2 237 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 IGF2-ASQ6U949 168 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 SYDE1Q6ZW31 735 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 LDB1Q86U70 411 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 JAMLQ86YT9 394 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 CFAP206Q8IYR0 622 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 GPR150Q8NGU9 434 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 RMDN2Q96LZ7 410 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 WWP1Q9H0M0 922 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 OR52A5Q9H2C5 316 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 COG4Q9H9E3 785 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 CATSPERZQ9NTU4 200 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 POT1Q9NUX5 634 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 TMEM9Q9P0T7 183 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 ASIC3Q9UHC3 531 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 ZMIZ1Q9ULJ6 1067 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 SATB2Q9UPW6 733 aa14.95□□□□□ -0.02
SNRPA1-213ENST00000560856 CACNA1BQ00975 2339 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 AHCTF1Q8WYP5 2266 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 CCDC187A0A096LP49 1063 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 IGHV5-10-1A0A0J9YXX1 117 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 FAM237BA0A1B0GVD1 139 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 TMX2-CTNND1H3BSU7 103 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 CD3EAPO15446 510 aaKnown RBP14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 TTI1O43156 1089 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 ZW10O43264 779 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 BRINP1O60477 761 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 VAPBO95292 243 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 POLBP06746 335 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 GSTM1P09488 218 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 LIMK2P53671 638 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 GABREP78334 506 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 GSTM4Q03013 218 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 C16orf72Q14CZ0 275 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 ST3GAL2Q16842 350 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 MAP9Q49MG5 647 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 ANKRD20A4Q4UJ75 823 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 FASTKD1Q53R41 847 aaKnown RBP14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 KIAA0930Q6ICG6 404 aaPredicted RBP14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 TMEM71Q6P5X7 295 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 TMEM135Q86UB9 458 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 RBM12BQ8IXT5 1001 aaKnown RBP14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 OR4D9Q8NGE8 314 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 WDR36Q8NI36 951 aaKnown RBP14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 RUNDC3BQ96NL0 473 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 TRIM51Q9BSJ1 452 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 STN1Q9H668 368 aaKnown RBP14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 ASCL3Q9NQ33 180 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 FAM8A1Q9UBU6 413 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 PCDHGA8Q9Y5G5 932 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 AK5Q9Y6K8 562 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 CELSR3Q9NYQ7 3312 aa14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 KMT2BQ9UMN6 2715 aaPredicted RBP14.94□□□□□ -0.02
SNRPA1-213ENST00000560856 ZCWPW2A0A1B0GU75 182 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 MAGEB16A2A368 324 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 TLX3O43711 291 aaPredicted RBP14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 THRAP10827 490 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 MTHFD1P11586 935 aaKnown RBP14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 PDHA2P29803 388 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 HALP42357 657 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 DR1Q01658 176 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 GPR18Q14330 331 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 MSS51Q4VC12 460 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 C3orf38Q5JPI3 329 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 IZUMO3Q5VZ72 239 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 WDR74Q6RFH5 385 aaPredicted RBP14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 HOOK3Q86VS8 718 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 TRIM48Q8IWZ4 208 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 SPATA4Q8NEY3 305 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms