RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 NDST3O95803 873 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 DLGAP3O95886 979 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 VIPP01282 170 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 VCLP18206 1134 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 CARSP49589 748 aaKnown RBP13.35□□□□□ -0.27
SMAD3-214ENST00000560402 CAV1Q03135 178 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 CDC20Q12834 499 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 CCNG2Q16589 344 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 TFDP3Q5H9I0 405 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 SPOCD1Q6ZMY3 1216 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 TMEM26Q6ZUK4 368 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 BZW1Q7L1Q6 419 aaKnown RBP13.35□□□□□ -0.27
SMAD3-214ENST00000560402 TMC3Q7Z5M5 1100 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 ADGRG6Q86SQ4 1221 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 GSPT2Q8IYD1 628 aaKnown RBP13.35□□□□□ -0.27
SMAD3-214ENST00000560402 GPR26Q8NDV2 337 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 LRRN4Q8WUT4 740 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 SEC14L1Q92503 715 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 C9orf72Q96LT7 481 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 TBC1D10AQ9BXI6 508 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 TRIM4Q9C037 500 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 KLC4Q9NSK0 619 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 FAM53CQ9NYF3 392 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 LOC101059948A0A1B0GTJ6 334 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 ESYT3A0FGR9 886 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 GOLGA6L10A6NI86 522 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 PRR19A6NJB7 356 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 C3orf70A6NLC5 250 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-214ENST00000560402 PYCARD-AS1I3L0S3 204 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 SASH3O75995 380 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 UBXN7O94888 489 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 SLC4A1P02730 911 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 ZNF7P17097 686 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-214ENST00000560402 STAT5AP42229 794 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 MRPS25P82663 173 aaKnown RBP13.34□□□□□ -0.27
SMAD3-214ENST00000560402 NFKB2Q00653 900 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 GTF2H3Q13889 308 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 AGAP9Q5VTM2 703 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 ZDHHC20Q5W0Z9 365 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 AADACL2Q6P093 401 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 CRTC3Q6UUV7 619 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 WASH2PQ6VEQ5 465 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 RFX6Q8HWS3 928 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 DTX3LQ8TDB6 740 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 STARD8Q92502 1023 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 RNF25Q96BH1 459 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-214ENST00000560402 EID2BQ96D98 161 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 AGAP3Q96P47 875 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 FMO2Q99518 471 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 CTRCQ99895 268 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 CEP41Q9BYV8 373 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 ZCCHC2Q9C0B9 1178 aaKnown RBP13.34□□□□□ -0.27
SMAD3-214ENST00000560402 DPH5Q9H2P9 285 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 TRABDQ9H4I3 376 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 ZNF768Q9H5H4 540 aaKnown RBP13.34□□□□□ -0.27
SMAD3-214ENST00000560402 GLOD4Q9HC38 313 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 APMAPQ9HDC9 416 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 WASH6PQ9NQA3 447 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 PRDM8Q9NQV8 689 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 KLHL3Q9UH77 587 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 ANAPC2Q9UJX6 822 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 SHOC2Q9UQ13 582 aa13.34□□□□□ -0.27
SMAD3-214ENST00000560402 PTPN13Q12923 2485 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 PDZK1P1A8MUH7 402 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 MTSS1O43312 755 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 KCNJ13O60928 360 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 MYBL2P10244 700 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 BPIP17213 487 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 CAPZBP47756 277 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 NR2C2P49116 596 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 GFERP55789 205 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 TFDP2Q14188 446 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 IL11RAQ14626 422 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 PCSK7Q16549 785 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 TEX44Q53QW1 395 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 DUPD1Q68J44 220 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 ABRAXAS1Q6UWZ7 409 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 GSTA5Q7RTV2 222 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 KDELC2Q7Z4H8 507 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 PRSS42Q7Z5A4 293 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 CCDC89Q8N998 374 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 C9orf43Q8TAL5 461 aaPredicted RBP13.33□□□□□ -0.28
SMAD3-214ENST00000560402 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.33□□□□□ -0.28
SMAD3-214ENST00000560402 HACD3Q9P035 362 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 ASIC3Q9UHC3 531 aa13.33□□□□□ -0.28
SMAD3-214ENST00000560402 BHMG1C9JSJ3 638 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-214ENST00000560402 CDK14O94921 469 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 PIRTP0C851 137 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 AMD1P17707 334 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 IDSP22304 550 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 OAS2P29728 719 aaKnown RBP13.32□□□□□ -0.28
SMAD3-214ENST00000560402 HMGCLP35914 325 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 SLC19A1P41440 591 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 HALP42357 657 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 PTGIRP43119 386 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 CBX1P83916 185 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 KLF1Q13351 362 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-214ENST00000560402 PTK6Q13882 451 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 SEPT6Q14141 434 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 PRKD1Q15139 912 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms