RNA–Protein interactions for RNA: ENST00000560365.5

IRF9-209, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-209ENST00000560365 ZNF501Q96CX3 271 aaPredicted RBP11.33□□□□□ -0.6
IRF9-209ENST00000560365 C19orf60Q96EN9 201 aa11.33□□□□□ -0.6
IRF9-209ENST00000560365 C17orf62Q9BQA9 187 aa11.33□□□□□ -0.6
IRF9-209ENST00000560365 DPH2Q9BQC3 489 aaPredicted RBP11.33□□□□□ -0.6
IRF9-209ENST00000560365 ISCUQ9H1K1 167 aa11.33□□□□□ -0.6
IRF9-209ENST00000560365 ACTR5Q9H9F9 607 aaPredicted RBP11.33□□□□□ -0.6
IRF9-209ENST00000560365 SYTL2Q9HCH5 934 aa11.33□□□□□ -0.6
IRF9-209ENST00000560365 AIPL1Q9NZN9 384 aa11.33□□□□□ -0.6
IRF9-209ENST00000560365 SPTBN1Q01082 2364 aaKnown RBP11.32□□□□□ -0.6
IRF9-209ENST00000560365 OR6C74A6NCV1 312 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 MATN2O00339 956 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 POP7O75817 140 aaKnown RBP11.32□□□□□ -0.6
IRF9-209ENST00000560365 MMP2P08253 660 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 HBQ1P09105 142 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 MTHFD1P11586 935 aaKnown RBP11.32□□□□□ -0.6
IRF9-209ENST00000560365 BPIP17213 487 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 OTX2P32243 289 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 GLRBP48167 497 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 RIPPLY3P57055 190 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 DMPKQ09013 629 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 ATP1A4Q13733 1029 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 LAMB3Q13751 1172 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 GSE1Q14687 1217 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 PPP2R5EQ16537 467 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 PLEKHN1Q494U1 663 aaPredicted RBP11.32□□□□□ -0.6
IRF9-209ENST00000560365 LDLRAP1Q5SW96 308 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 PLEKHS1Q5SXH7 462 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 C1QL3Q5VWW1 255 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 HGSNATQ68CP4 663 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 C11orf96Q7Z7L8 435 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 SYTL1Q8IYJ3 562 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 ZADH2Q8N4Q0 377 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.32□□□□□ -0.6
IRF9-209ENST00000560365 ZFPM2Q8WW38 1151 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 N4BP2L2Q92802 583 aaPredicted RBP11.32□□□□□ -0.6
IRF9-209ENST00000560365 EID2BQ96D98 161 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 BTBD6Q96KE9 485 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 TLR10Q9BXR5 811 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 BPIFA1Q9NP55 256 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.32□□□□□ -0.6
IRF9-209ENST00000560365 CHMP5Q9NZZ3 219 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 SERTAD3Q9UJW9 196 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 BTRCQ9Y297 605 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 DNMT3AQ9Y6K1 912 aaPredicted RBP11.32□□□□□ -0.6
IRF9-209ENST00000560365 COLEC10Q9Y6Z7 277 aa11.32□□□□□ -0.6
IRF9-209ENST00000560365 CREBBPQ92793 2442 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 CD63P08962 238 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 SLC35G4P0C7Q5 338 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 HLA-DPA1P20036 260 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 NDUFS1P28331 727 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 PBLDP30039 288 aaPredicted RBP11.31□□□□□ -0.6
IRF9-209ENST00000560365 AKT1P31749 480 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 HADHAP40939 763 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 PREPP48147 710 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 IFI35P80217 286 aaPredicted RBP11.31□□□□□ -0.6
IRF9-209ENST00000560365 GBE1Q04446 702 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 AP1B1Q10567 949 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 NCF4Q15080 339 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 STX1AQ16623 288 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 LONRF2Q1L5Z9 754 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 ATP13A5Q4VNC0 1218 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 KHDC1Q4VXA5 237 aaKnown RBP11.31□□□□□ -0.6
IRF9-209ENST00000560365 TMEM220Q6QAJ8 160 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 ZBTB2Q8N680 514 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 SLC38A9Q8NBW4 561 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 FAM71BQ8TC56 605 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 LRRN4Q8WUT4 740 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 MARVELD3Q96A59 401 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 C12orf66Q96MD2 445 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 AGAP3Q96P47 875 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 TRIB3Q96RU7 358 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 DHRS4Q9BTZ2 278 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 THAP2Q9H0W7 228 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 C1GALT1Q9NS00 363 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 GPN3Q9UHW5 284 aaPredicted RBP11.31□□□□□ -0.6
IRF9-209ENST00000560365 HEY1Q9Y5J3 304 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 CFAP20Q9Y6A4 193 aaKnown RBP11.31□□□□□ -0.6
IRF9-209ENST00000560365 ICE1Q9Y2F5 2266 aa11.31□□□□□ -0.6
IRF9-209ENST00000560365 ARHGAP10A1A4S6 786 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 GSAPA4D1B5 854 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 KLHL33A6NCF5 533 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 OR2AG2A6NM03 316 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 TMEM150CB9EJG8 249 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 E7EQ34 232 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 PPP1R12AO14974 1030 aaPredicted RBP11.3□□□□□ -0.6
IRF9-209ENST00000560365 NDST3O95803 873 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 SKILP12757 684 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 POLR2CP19387 275 aaPredicted RBP11.3□□□□□ -0.6
IRF9-209ENST00000560365 MSH3P20585 1137 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 HMGCLP35914 325 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 SPAM1P38567 509 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 PPIDQ08752 370 aaKnown RBP11.3□□□□□ -0.6
IRF9-209ENST00000560365 ZBTB17Q13105 803 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 ITGA9Q13797 1035 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 NFE2L1Q14494 772 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 MYBPC3Q14896 1274 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 HOOK3Q86VS8 718 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 GPR135Q8IZ08 494 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 GALNT16Q8N428 558 aa11.3□□□□□ -0.6
IRF9-209ENST00000560365 UBE2Q2Q8WVN8 375 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms