RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PUM1Q14671 1186 aaKnown RBP eCLIP14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 CCDC6Q16204 474 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 ZNF542PQ5EBM4 170 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 PRAMEF14Q5SWL7 426 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 DGLUCYQ7Z3D6 616 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 HID1Q8IV36 788 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 CNPY4Q8N129 248 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 FSTL5Q8N475 847 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 PPM1NQ8N819 430 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 ZNF548Q8NEK5 533 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 GIMAP7Q8NHV1 300 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 UBLCP1Q8WVY7 318 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 IL21RQ9HBE5 538 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 POPDC3Q9HBV1 291 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 DNAJC28Q9NX36 388 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 APOBEC3BQ9UH17 382 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 MTO1Q9Y2Z2 717 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 PRKAB1Q9Y478 270 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 PCDHGB2Q9Y5G2 931 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 ARID1BQ8NFD5 2236 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 UBA6A0AVT1 1052 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 MED19A0JLT2 244 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 IQCF5A8MTL0 148 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 LMO7DNF2Z398 122 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 FOXD2O60548 495 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 SLCO2B1O94956 709 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 CER1O95813 267 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 FTH1P02794 183 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 CELA2BP08218 269 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 ITGA2BP08514 1039 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 DGKAP23743 735 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 SPRP35270 261 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 ABCG1P45844 678 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 CDKN2DP55273 166 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 BNIP3Q12983 259 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 RPA4Q13156 261 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 AGAP9Q5VTM2 703 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 FAM45BPQ6NSW5 357 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 FBXO38Q6PIJ6 1188 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 OGFOD3Q6PK18 319 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 LVRNQ6Q4G3 990 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 FAM83HQ6ZRV2 1179 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 DET1Q7L5Y6 550 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 AMZ2Q86W34 360 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 TRAPPC5Q8IUR0 188 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 OTUD6BQ8N6M0 293 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 CCL4L1Q8NHW4 92 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 UHMK1Q8TAS1 419 aaKnown RBP14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 FAM45AQ8TCE6 357 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 HM13Q8TCT9 377 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 CD200R1Q8TD46 325 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 PANX3Q96QZ0 392 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 SLC30A3Q99726 388 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 OLFM1Q99784 485 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 OR52A5Q9H2C5 316 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 GAREM1Q9H706 876 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 RXFP3Q9NSD7 469 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 ZNHIT2Q9UHR6 403 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 VWA7Q9Y334 891 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 DHRS7Q9Y394 339 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 CABIN1Q9Y6J0 2220 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 CACNA1BQ00975 2339 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 ACACBO00763 2458 aa14.54□□□□□ -0.08
SNRPA1-207ENST00000559309 TDRD6O60522 2096 aaKnown RBP14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 ARHGEF17Q96PE2 2063 aaPredicted RBP14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 EXOC1LA0A1B0GW35 172 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 FAM95CA0A1B0GW59 222 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 F8W8V4 182 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 H3BM21 787 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 EIF3FO00303 357 aaPredicted RBP14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 TPP1O14773 563 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 LIN7AO14910 233 aaPredicted RBP14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 SCAMP1O15126 338 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 AQP9O43315 295 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 TSPAN12O95859 305 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 BRAFP15056 766 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 CNTFP26441 200 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 ATP5DP30049 168 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 ARRB1P49407 418 aaPredicted RBP14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 SERPINB9P50453 376 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 TAS2R39P59534 338 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 POU4F1Q01851 419 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 SPEM2Q0P670 501 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 ELOCQ15369 112 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 SF3A2Q15428 464 aaKnown RBP14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 PLEKHS1Q5SXH7 462 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 HECTD2Q5U5R9 776 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 CAPRIN2Q6IMN6 1127 aaKnown RBP14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 TMEM207Q6UWW9 146 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 ABRAXAS1Q6UWZ7 409 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 TIFABQ6ZNK6 161 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 CHST15Q7LFX5 561 aaPredicted RBP14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 CEP97Q8IW35 865 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 CTAGE3PQ8IX95 158 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 MINDY1Q8N5J2 469 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 LILRA3Q8N6C8 439 aaPredicted RBP14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 GLMNQ92990 594 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 NDNQ99608 321 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 SLC13A1Q9BZW2 595 aa14.53□□□□□ -0.08
SNRPA1-207ENST00000559309 ROPN1BQ9BZX4 212 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms