RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 MGAT4DA6NG13 374 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 PRPF4O43172 522 aaKnown RBP eCLIP17.76■□□□□ 0.432e-17■■■■■ 32.5
CLPX-203ENST00000558958 GALR2O43603 387 aaPredicted RBP17.76■□□□□ 0.43
CLPX-203ENST00000558958 KLHL2O95198 593 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 TSPAN12O95859 305 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 GSTA1P08263 222 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 ITPKAP23677 461 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 HPDP32754 393 aaPredicted RBP17.76■□□□□ 0.43
CLPX-203ENST00000558958 DHPSP49366 369 aaPredicted RBP17.76■□□□□ 0.43
CLPX-203ENST00000558958 IL2P60568 153 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 DLG1Q12959 904 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 GBX1Q14549 363 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 INSCQ1MX18 579 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 TTLL9Q3SXZ7 439 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 PYCR3Q53H96 274 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 PLEKHS1Q5SXH7 462 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 CDHR3Q6ZTQ4 885 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 LCA5Q86VQ0 697 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 GALNT13Q8IUC8 556 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 CPNE9Q8IYJ1 553 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 OXR1Q8N573 874 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 OR2L2Q8NH16 312 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 KCTD4Q8WVF5 259 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 ASZ1Q8WWH4 475 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 PDXPQ96GD0 296 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 CYP4F12Q9HCS2 524 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 IGSF5Q9NSI5 407 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 KLQ9UEF7 1012 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 PNMA8BQ9ULN7 279 aaPredicted RBP17.76■□□□□ 0.43
CLPX-203ENST00000558958 SMG5Q9UPR3 1016 aaKnown RBP17.76■□□□□ 0.43
CLPX-203ENST00000558958 PCDHGA2Q9Y5H1 932 aa17.76■□□□□ 0.43
CLPX-203ENST00000558958 BCAT2O15382 392 aaPredicted RBP17.75■□□□□ 0.43
CLPX-203ENST00000558958 GLRA3O75311 464 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 GPC4O75487 556 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 APOA4P06727 396 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 LTA4HP09960 611 aaKnown RBP17.75■□□□□ 0.43
CLPX-203ENST00000558958 PBLDP30039 288 aaPredicted RBP17.75■□□□□ 0.43
CLPX-203ENST00000558958 SRP54P61011 504 aaKnown RBP17.75■□□□□ 0.43
CLPX-203ENST00000558958 ARHGAP8P85298 464 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 HSPA14Q0VDF9 509 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 BOP1Q14137 746 aaKnown RBP17.75■□□□□ 0.43
CLPX-203ENST00000558958 FZD2Q14332 565 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 CSHL1Q14406 222 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 ACSBG2Q5FVE4 666 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 CEP68Q76N32 757 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 AMZ2Q86W34 360 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 SPATA6LQ8N4H0 392 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 HM13Q8TCT9 377 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 EEF1AKMT1Q8WVE0 214 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 TSACCQ96A04 125 aaPredicted RBP17.75■□□□□ 0.43
CLPX-203ENST00000558958 NXNL1Q96CM4 212 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 PDLIM5Q96HC4 596 aaKnown RBP17.75■□□□□ 0.43
CLPX-203ENST00000558958 GPR78Q96P69 363 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 CARS2Q9HA77 564 aaKnown RBP17.75■□□□□ 0.43
CLPX-203ENST00000558958 KCNK9Q9NPC2 374 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 TM7SF3Q9NS93 570 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 ZNF358Q9NW07 568 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 SLC23A2Q9UGH3 650 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 MOSPD1Q9UJG1 213 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 CDYLQ9Y232 598 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 SLC5A10A0PJK1 596 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 TMEM120BA0PK00 339 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 KLHL33A6NCF5 533 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 TLR4O00206 839 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 EIF3FO00303 357 aaPredicted RBP17.75■□□□□ 0.43
CLPX-203ENST00000558958 LIN7AO14910 233 aaPredicted RBP17.75■□□□□ 0.43
CLPX-203ENST00000558958 SLCO2B1O94956 709 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 CBSLP0DN79 551 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 NR1D1P20393 614 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 DGKAP23743 735 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 CBSP35520 551 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 GNPDA1P46926 289 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 MPP2Q14168 576 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 FAM83EQ2M2I3 478 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 ALG11Q2TAA5 492 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 PLA2G4EQ3MJ16 856 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 AGAP9Q5VTM2 703 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 LAYNQ6UX15 382 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 XKR5Q6UX68 686 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 LINGO1Q96FE5 620 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 OR2M4Q96R27 311 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 TIMM29Q9BSF4 260 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 DERL2Q9GZP9 239 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 GRID1Q9ULK0 1009 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 RUVBL2Q9Y230 463 aaKnown RBP17.75■□□□□ 0.43
CLPX-203ENST00000558958 PLLPQ9Y342 182 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 DGKBQ9Y6T7 804 aa17.75■□□□□ 0.43
CLPX-203ENST00000558958 VILLO15195 856 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 KCNJ13O60928 360 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 ENO3P13929 434 aaPredicted RBP17.74■□□□□ 0.43
CLPX-203ENST00000558958 CD1DP15813 335 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 OAS2P29728 719 aaKnown RBP17.74■□□□□ 0.43
CLPX-203ENST00000558958 RPA3P35244 121 aaPredicted RBP17.74■□□□□ 0.43
CLPX-203ENST00000558958 RGS4P49798 205 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 AFF3P51826 1226 aaKnown RBP17.74■□□□□ 0.43
CLPX-203ENST00000558958 SLC18A1P54219 525 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 PPP2R2AP63151 447 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 EIF2B5Q13144 721 aaKnown RBP17.74■□□□□ 0.43
CLPX-203ENST00000558958 TSNAXIP1Q2TAA8 658 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 SYTL3Q4VX76 610 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms