RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 SNX20Q7Z614 316 aa16.66■□□□□ 0.26
LRRC28-210ENST00000558879 NXPE1Q8N323 547 aa16.66■□□□□ 0.26
LRRC28-210ENST00000558879 FAM71DQ8N9W8 422 aa16.66■□□□□ 0.26
LRRC28-210ENST00000558879 JPH3Q8WXH2 748 aaPredicted RBP16.66■□□□□ 0.26
LRRC28-210ENST00000558879 ULK4Q96C45 1275 aa16.66■□□□□ 0.26
LRRC28-210ENST00000558879 TMEM121Q9BTD3 319 aa16.66■□□□□ 0.26
LRRC28-210ENST00000558879 HELZ2Q9BYK8 2649 aaKnown RBP16.66■□□□□ 0.26
LRRC28-210ENST00000558879 LRRC40Q9H9A6 602 aa16.66■□□□□ 0.26
LRRC28-210ENST00000558879 WDR70Q9NW82 654 aa16.66■□□□□ 0.26
LRRC28-210ENST00000558879 SEMA5BQ9P283 1151 aa16.66■□□□□ 0.26
LRRC28-210ENST00000558879 ZNF462Q96JM2 2506 aa16.66■□□□□ 0.26
LRRC28-210ENST00000558879 FER1L5A0AVI2 2057 aa16.66■□□□□ 0.26
LRRC28-210ENST00000558879 SPTBP11277 2137 aa16.66■□□□□ 0.26
LRRC28-210ENST00000558879 AP2A1O95782 977 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 MTHFD1P11586 935 aaKnown RBP16.65■□□□□ 0.26
LRRC28-210ENST00000558879 LIFP15018 202 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 AMD1P17707 334 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 ITGALP20701 1170 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 PBLDP30039 288 aaPredicted RBP16.65■□□□□ 0.26
LRRC28-210ENST00000558879 OASLQ15646 514 aaKnown RBP16.65■□□□□ 0.26
LRRC28-210ENST00000558879 ZNF658BQ4V348 819 aaPredicted RBP16.65■□□□□ 0.26
LRRC28-210ENST00000558879 DET1Q7L5Y6 550 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 CACNA2D3Q8IZS8 1091 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 NAT14Q8WUY8 206 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 LRRC45Q96CN5 670 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 MED8Q96G25 268 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 DNAJC1Q96KC8 554 aaKnown RBP16.65■□□□□ 0.26
LRRC28-210ENST00000558879 TGM7Q96PF1 710 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 CTRCQ99895 268 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 SLC12A9Q9BXP2 914 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 TSGA10Q9BZW7 698 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 CRLS1Q9UJA2 301 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 PSMD13Q9UNM6 376 aa16.65■□□□□ 0.26
LRRC28-210ENST00000558879 CCL22O00626 93 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 STK17BO94768 372 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 PTMAP06454 111 aaKnown RBP16.64■□□□□ 0.25
LRRC28-210ENST00000558879 PSMA3P25788 255 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 MC4RP32245 332 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 GSDMDP57764 484 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 PPP1CAP62136 330 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 TMPRSS15P98073 1019 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 MAP7Q14244 749 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 SEL1L2Q5TEA6 688 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 MICALCLQ6ZW33 695 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 TIPARPQ7Z3E1 657 aaKnown RBP16.64■□□□□ 0.25
LRRC28-210ENST00000558879 NLGN4XQ8N0W4 816 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 IL22RA1Q8N6P7 574 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 NLGN4YQ8NFZ3 816 aaPredicted RBP16.64■□□□□ 0.25
LRRC28-210ENST00000558879 HM13Q8TCT9 377 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 UBE2Q2Q8WVN8 375 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 ATG4AQ8WYN0 398 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 KLHL6Q8WZ60 621 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 RMDN2Q96LZ7 410 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 WWP1Q9H0M0 922 aa16.64■□□□□ 0.25
LRRC28-210ENST00000558879 NLE1Q9NVX2 485 aaPredicted RBP16.64■□□□□ 0.25
LRRC28-210ENST00000558879 TLN1Q9Y490 2541 aaKnown RBP16.63■□□□□ 0.25
LRRC28-210ENST00000558879 GOLGA6L3A6NEY3 463 aa16.63■□□□□ 0.25
LRRC28-210ENST00000558879 GOLGA6L6A8MZA4 724 aa16.63■□□□□ 0.25
LRRC28-210ENST00000558879 POLR1CO15160 346 aaPredicted RBP16.63■□□□□ 0.25
LRRC28-210ENST00000558879 LIASO43766 372 aa16.63■□□□□ 0.25
LRRC28-210ENST00000558879 KRT86O43790 486 aa16.63■□□□□ 0.25
LRRC28-210ENST00000558879 KIF1CO43896 1103 aaKnown RBP16.63■□□□□ 0.25
LRRC28-210ENST00000558879 ACRV1P26436 265 aa16.63■□□□□ 0.25
LRRC28-210ENST00000558879 GPR33Q49SQ1 333 aa16.63■□□□□ 0.25
LRRC28-210ENST00000558879 DUS1LQ6P1R4 473 aaKnown RBP16.63■□□□□ 0.25
LRRC28-210ENST00000558879 LILRA3Q8N6C8 439 aaPredicted RBP16.63■□□□□ 0.25
LRRC28-210ENST00000558879 ZSCAN1Q8NBB4 408 aa16.63■□□□□ 0.25
LRRC28-210ENST00000558879 HEXDCQ8WVB3 486 aa16.63■□□□□ 0.25
LRRC28-210ENST00000558879 INSM2Q96T92 566 aaPredicted RBP16.63■□□□□ 0.25
LRRC28-210ENST00000558879 COPS8Q99627 209 aa16.63■□□□□ 0.25
LRRC28-210ENST00000558879 FRMD8P1Q9BZ68 369 aaPredicted RBP16.63■□□□□ 0.25
LRRC28-210ENST00000558879 ZDHHC3Q9NYG2 299 aa16.63■□□□□ 0.25
LRRC28-210ENST00000558879 ACSL5Q9ULC5 683 aa16.63■□□□□ 0.25
LRRC28-210ENST00000558879 CFAP99D6REC4 459 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 ARHGAP6O43182 974 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 PSMD3O43242 534 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 RALBP11234 206 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 ATP1B2P14415 290 aaPredicted RBP16.62■□□□□ 0.25
LRRC28-210ENST00000558879 SEPHS1P49903 392 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 CDKN1CP49918 316 aaPredicted RBP16.62■□□□□ 0.25
LRRC28-210ENST00000558879 SH3BP2P78314 561 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 ABHD18Q0P651 414 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 POU6F1Q14863 301 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 CAPRIN2Q6IMN6 1127 aaKnown RBP16.62■□□□□ 0.25
LRRC28-210ENST00000558879 ZNF662Q6ZS27 426 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 SLC13A5Q86YT5 568 aaPredicted RBP16.62■□□□□ 0.25
LRRC28-210ENST00000558879 EXD3Q8N9H8 876 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 SPDYE1Q8NFV5 336 aaPredicted RBP16.62■□□□□ 0.25
LRRC28-210ENST00000558879 STYXQ8WUJ0 223 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 ZFPM2Q8WW38 1151 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 EXTL1Q92935 676 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 ZDHHC12Q96GR4 267 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 SLC41A2Q96JW4 573 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 C12orf66Q96MD2 445 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 FAM96AQ9H5X1 160 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 KIR3DX1Q9H7L2 352 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 IMP3Q9NV31 184 aaKnown RBP16.62■□□□□ 0.25
LRRC28-210ENST00000558879 GUCA1BQ9UMX6 200 aa16.62■□□□□ 0.25
LRRC28-210ENST00000558879 CFAP20Q9Y6A4 193 aaKnown RBP16.62■□□□□ 0.25
LRRC28-210ENST00000558879 BOD1L1Q8NFC6 3051 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms