RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 Q6ZSR9 355 aa10.4□□□□□ -0.75
TPM1-210ENST00000558264 FAM43BQ6ZT52 329 aaPredicted RBP10.4□□□□□ -0.75
TPM1-210ENST00000558264 USP45Q70EL2 814 aa10.4□□□□□ -0.75
TPM1-210ENST00000558264 AMIGO2Q86SJ2 522 aa10.4□□□□□ -0.75
TPM1-210ENST00000558264 ADAMTSL2Q86TH1 951 aa10.4□□□□□ -0.75
TPM1-210ENST00000558264 SFRP1Q8N474 314 aa10.4□□□□□ -0.75
TPM1-210ENST00000558264 LRTOMTQ8WZ04 291 aa10.4□□□□□ -0.75
TPM1-210ENST00000558264 MTFMTQ96DP5 389 aaKnown RBP10.4□□□□□ -0.75
TPM1-210ENST00000558264 SCRN2Q96FV2 425 aa10.4□□□□□ -0.75
TPM1-210ENST00000558264 BRD9Q9H8M2 597 aa10.4□□□□□ -0.75
TPM1-210ENST00000558264 NUDT4Q9NZJ9 180 aa10.4□□□□□ -0.75
TPM1-210ENST00000558264 CIDEBQ9UHD4 219 aa10.4□□□□□ -0.75
TPM1-210ENST00000558264 USP22Q9UPT9 525 aa10.4□□□□□ -0.75
TPM1-210ENST00000558264 FXYD1O00168 92 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 GRM6O15303 877 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 RAD51BO15315 384 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 TLL1O43897 1013 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 LINGO3P0C6S8 592 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 IDO1P14902 403 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 SYN1P17600 705 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 ATP6V1B2P21281 511 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 IL12AP29459 219 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 GRIA3P42263 894 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 RGS4P49798 205 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 ATP4BP51164 291 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 MRPS35P82673 323 aaKnown RBP10.39□□□□□ -0.75
TPM1-210ENST00000558264 ILF2Q12905 390 aaKnown RBP10.39□□□□□ -0.75
TPM1-210ENST00000558264 BOP1Q14137 746 aaKnown RBP10.39□□□□□ -0.75
TPM1-210ENST00000558264 ARHGEF7Q14155 803 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 NR6A1Q15406 480 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 CARD16Q5EG05 197 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 XKR7Q5GH72 579 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 C6orf136Q5SQH8 315 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 OGFRL1Q5TC84 451 aaPredicted RBP10.39□□□□□ -0.75
TPM1-210ENST00000558264 GRAMD4Q6IC98 578 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 CAPRIN2Q6IMN6 1127 aaKnown RBP10.39□□□□□ -0.75
TPM1-210ENST00000558264 SERPINA13PQ6UXR4 307 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 TPRG1Q6ZUI0 275 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 BEND7Q8N7W2 519 aaPredicted RBP10.39□□□□□ -0.75
TPM1-210ENST00000558264 MRPL43Q8N983 215 aaKnown RBP10.39□□□□□ -0.75
TPM1-210ENST00000558264 GATA6Q92908 595 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 TMEM74Q96NL1 305 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 TMEM79Q9BSE2 394 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 FAM126AQ9BYI3 521 aaPredicted RBP10.39□□□□□ -0.75
TPM1-210ENST00000558264 AIG1Q9NVV5 245 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 TMEM181Q9P2C4 612 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 SUCOQ9UBS9 1254 aaKnown RBP10.39□□□□□ -0.75
TPM1-210ENST00000558264 HS3ST2Q9Y278 367 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 INSL6Q9Y581 213 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 ANGPTL3Q9Y5C1 460 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 TRBV5-4A0A0C4DH59 114 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 TPST1O60507 370 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 EFCAB14O75071 495 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 LYNP07948 512 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 PSMC3P17980 439 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 AKT1P31749 480 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 CCR7P32248 378 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 MAPK8P45983 427 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 RPL26P61254 145 aaKnown RBP10.39□□□□□ -0.75
TPM1-210ENST00000558264 HTRA4P83105 476 aaPredicted RBP10.39□□□□□ -0.75
TPM1-210ENST00000558264 HMGCS1Q01581 520 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 NFYCQ13952 458 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 GK3PQ14409 553 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 NRF1Q16656 503 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 ATP6AP1LQ52LC2 224 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 TCEAL5Q5H9L2 206 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 GPRC6AQ5T6X5 926 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 RNF220Q5VTB9 566 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 BLOC1S3Q6QNY0 202 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 NECAB2Q7Z6G3 386 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 ADIPOR2Q86V24 386 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 VRK3Q8IV63 474 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 PCYOX1LQ8NBM8 494 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 ICA1LQ8NDH6 482 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 IRF7Q92985 503 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 ZNF382Q96SR6 550 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 C1QTNF3Q9BXJ4 246 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 SPHK2Q9NRA0 654 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 CMTM6Q9NX76 183 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 EPS15L1Q9UBC2 864 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 CD300AQ9UGN4 299 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 ZNHIT2Q9UHR6 403 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 SARDHQ9UL12 918 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 TMPRSS11EQ9UL52 423 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 POLR3HQ9Y535 204 aaPredicted RBP10.39□□□□□ -0.75
TPM1-210ENST00000558264 SNX13Q9Y5W8 968 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 SZT2Q5T011 3432 aa10.39□□□□□ -0.75
TPM1-210ENST00000558264 SCN8AQ9UQD0 1980 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 PRSS51A0A1B0GVH4 220 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 A6NHS1 94 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 CASQ2O14958 399 aaPredicted RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 G6PDP11413 515 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 NCK1P16333 377 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 VCLP18206 1134 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 DGKAP23743 735 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 HMOX2P30519 316 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 GGT5P36269 586 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 ZFP36L2P47974 494 aaKnown RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 KCNK10P57789 538 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 MESP2Q0VG99 397 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms