RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 HAUS1Q96CS2 278 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 DCUN1D1Q96GG9 259 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 ELMO2Q96JJ3 720 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 CD180Q99467 661 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 HEMGNQ9BXL5 484 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 SMOXQ9NWM0 555 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 RARRES3Q9UL19 164 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 PSMD13Q9UNM6 376 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 WDR37Q9Y2I8 494 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 COLEC10Q9Y6Z7 277 aa13.33□□□□□ -0.28
SNRPA1-204ENST00000558020 UBA6A0AVT1 1052 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 GOLGA6L3A6NEY3 463 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 MGAT4DA6NG13 374 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 OR2AG2A6NM03 316 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 F5H423 210 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 MKRN2OSH3BPM6 223 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 ARHGAP6O43182 974 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 MAP3K7O43318 606 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 KIF1CO43896 1103 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 PRAMEF1O95521 474 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 CRTAMO95727 393 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 AGTP01019 485 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 OAS2P29728 719 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 CASRP41180 1078 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 HSD11B2P80365 405 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 ADCY2Q08462 1091 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 NOMO1Q15155 1222 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 TAF1AQ15573 450 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 TMTC4Q5T4D3 741 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 ZNF449Q6P9G9 518 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 HEXDCQ8WVB3 486 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 ABHD17AQ96GS6 310 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 CCM2Q9BSQ5 444 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 GBA3Q9H227 469 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 ASB8Q9H765 288 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 ZNF71Q9NQZ8 489 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 IMP3Q9NV31 184 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 HRASLS2Q9NWW9 162 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 SEMA5BQ9P283 1151 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 CROTQ9UKG9 612 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 POLHQ9Y253 713 aa13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 UBR5O95071 2799 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-204ENST00000558020 PIPSLA2A3N6 862 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 C21orf140B9A014 251 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 BUD23O43709 281 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 SLC35G4P0C7Q5 338 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 MTHFD1P11586 935 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 ZNF28P17035 718 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 NDUFS1P28331 727 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 RBL1P28749 1068 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 HADHAP40939 763 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 CTSCP53634 463 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 NAP1L1P55209 391 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 TUBB3Q13509 450 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 ERV3-1Q14264 604 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 NFE2L1Q14494 772 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 GSE1Q14687 1217 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 LACTB2Q53H82 288 aaPredicted RBP13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 DNTTIP2Q5QJE6 756 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 DARS2Q6PI48 645 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 RANBP10Q6VN20 620 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 OOSP2Q86WS3 158 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 CDKL3Q8IVW4 592 aaPredicted RBP13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 CARFQ8N187 725 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 OR4K2Q8NGD2 314 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 OR2L2Q8NH16 312 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 OR8K5Q8NH50 307 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 ULK4Q96C45 1275 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 SLC41A2Q96JW4 573 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 C19orf43Q9BQ61 176 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 FICDQ9BVA6 458 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 GPR87Q9BY21 358 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 GOLPH3Q9H4A6 298 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 FEZ2Q9UHY8 353 aaPredicted RBP13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 PCDHGA6Q9Y5G7 932 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 PCDHA3Q9Y5H8 950 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 HEBP2Q9Y5Z4 205 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 KCNMB2Q9Y691 235 aa13.31□□□□□ -0.28
SNRPA1-204ENST00000558020 IGHV5-51A0A0C4DH38 117 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 MACROD2A1Z1Q3 448 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 CCDC66A2RUB6 948 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 OR5K3A6NET4 321 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 TLCD2A6NGC4 264 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 CFAP99D6REC4 459 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 CREG1O75629 220 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 SRP72O76094 671 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 TJP3O95049 919 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 PTMAP06454 111 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 PBLDP30039 288 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 EIF3EP60228 445 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 RPS15P62841 145 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 PRKAA1Q13131 559 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 SARM1Q6SZW1 724 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 FAM83HQ6ZRV2 1179 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 DET1Q7L5Y6 550 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 CFAP206Q8IYR0 622 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 TC2NQ8N9U0 490 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 ACTL9Q8TC94 416 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 C12orf66Q96MD2 445 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 TWSG1Q9GZX9 223 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms