RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 COL5A1P20908 1838 aaPredicted RBP14.06□□□□□ -0.16
USP3-205ENST00000557884 PRAMEF33A0A0G2JMD5 474 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 MED19A0JLT2 244 aaPredicted RBP14.06□□□□□ -0.16
USP3-205ENST00000557884 E7ESA3 106 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 PRMT5O14744 637 aaPredicted RBP14.06□□□□□ -0.16
USP3-205ENST00000557884 PPM1DO15297 605 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 HYAL3O43820 417 aaPredicted RBP14.06□□□□□ -0.16
USP3-205ENST00000557884 OPA1O60313 960 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 KCNJ13O60928 360 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 SLC2A4P14672 509 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 GLB1P16278 677 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 OGNP20774 298 aaKnown RBP14.06□□□□□ -0.16
USP3-205ENST00000557884 FMO4P31512 558 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 SLC1A2P43004 574 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 PREPP48147 710 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 CSE1LP55060 971 aaKnown RBP14.06□□□□□ -0.16
USP3-205ENST00000557884 MPP1Q00013 466 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 CAV1Q03135 178 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 ILKQ13418 452 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 CLCA4Q14CN2 919 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 BRD3Q15059 726 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 TYSND1Q2T9J0 566 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 ZNF789Q5FWF6 425 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 AGAP9Q5VTM2 703 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 METRNLQ641Q3 311 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 PTRHD1Q6GMV3 140 aaKnown RBP14.06□□□□□ -0.16
USP3-205ENST00000557884 MARCH9Q86YJ5 346 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 CILP2Q8IUL8 1156 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 TRIM48Q8IWZ4 208 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 KRT222Q8N1A0 295 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 SPDYE1Q8NFV5 336 aaPredicted RBP14.06□□□□□ -0.16
USP3-205ENST00000557884 OR6C4Q8NGE1 309 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 ADAMTS14Q8WXS8 1223 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 ELMO1Q92556 727 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 LPGAT1Q92604 370 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 WWP1Q9H0M0 922 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 ABCG4Q9H172 646 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 COG4Q9H9E3 785 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 PPANQ9NQ55 473 aaKnown RBP14.06□□□□□ -0.16
USP3-205ENST00000557884 SLC17A6Q9P2U8 582 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 CPNE7Q9UBL6 633 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 CRYL1Q9Y2S2 319 aa14.06□□□□□ -0.16
USP3-205ENST00000557884 CFAP20Q9Y6A4 193 aaKnown RBP14.06□□□□□ -0.16
USP3-205ENST00000557884 KIR2DS5A0A0G2JLQ3 304 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 A0A0G2JNG1 304 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 KIR2DS3K7RE56 304 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 QSOX1O00391 747 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 PFDN6O15212 129 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 NUDT21O43809 227 aaKnown RBP14.05□□□□□ -0.16
USP3-205ENST00000557884 TRIM16O95361 564 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 FTH1P02794 183 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 GP1BAP07359 652 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 SPINK2P20155 84 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 ALDH4A1P30038 563 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 SLC19A1P41440 591 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 HALP42357 657 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 OR1D5P58170 312 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 UBE2IP63279 158 aaKnown RBP14.05□□□□□ -0.16
USP3-205ENST00000557884 CCL7P80098 99 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 E2F1Q01094 437 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 INSM1Q01101 510 aaPredicted RBP14.05□□□□□ -0.16
USP3-205ENST00000557884 HHEXQ03014 270 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 BOP1Q14137 746 aaKnown RBP14.05□□□□□ -0.16
USP3-205ENST00000557884 KIR2DS5Q14953 304 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 GLE1Q53GS7 698 aaKnown RBP14.05□□□□□ -0.16
USP3-205ENST00000557884 CTSL3PQ5NE16 218 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 RNF187Q5TA31 235 aaPredicted RBP14.05□□□□□ -0.16
USP3-205ENST00000557884 HES3Q5TGS1 186 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 STEAP4Q687X5 459 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 TRMT10BQ6PF06 316 aaKnown RBP14.05□□□□□ -0.16
USP3-205ENST00000557884 ABRAXAS1Q6UWZ7 409 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 WASH2PQ6VEQ5 465 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 RAB44Q7Z6P3 723 aaPredicted RBP14.05□□□□□ -0.16
USP3-205ENST00000557884 CCNJLQ8IV13 435 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 PYROXD1Q8WU10 500 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 IFT81Q8WYA0 676 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 SEC14L1Q92503 715 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 FAM136AQ96C01 138 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 RMDN2Q96LZ7 410 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 TCF12Q99081 682 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 FAM167BQ9BTA0 163 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 P2RY12Q9H244 342 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 WASH6PQ9NQA3 447 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 ZNF624Q9P2J8 865 aaPredicted RBP14.05□□□□□ -0.16
USP3-205ENST00000557884 GNPTGQ9UJJ9 305 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 ACSL5Q9ULC5 683 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 PLXNB3Q9ULL4 1909 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 PCNX2A6NKB5 2137 aa14.05□□□□□ -0.16
USP3-205ENST00000557884 C17orf113A0A1B0GUU1 675 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 FAM149AA5PLN7 773 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 KLHL33A6NCF5 533 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 OR5K4A6NMS3 321 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 BHMG1C9JSJ3 638 aaPredicted RBP14.04□□□□□ -0.16
USP3-205ENST00000557884 F8W8V4 182 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 EIF3HO15372 352 aaKnown RBP eCLIP14.04□□□□□ -0.16
USP3-205ENST00000557884 S1PR4O95977 384 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 VIPP01282 170 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 RPLP0P05388 317 aaKnown RBP14.04□□□□□ -0.16
USP3-205ENST00000557884 ADRB1P08588 477 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 RHOXF2BP0C7M4 288 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms