RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ZDHHC20Q5W0Z9 365 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CES4AQ5XG92 561 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 SLC25A24Q6NUK1 477 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CEP85Q6P2H3 762 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 ZCCHC12Q6PEW1 402 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 BRAT1Q6PJG6 821 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 FIGLAQ6QHK4 219 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 Q6ZNX1 250 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 RNF207Q6ZRF8 634 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 PLEKHM3Q6ZWE6 761 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CAMK1DQ8IU85 385 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 SERPINA12Q8IW75 414 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 ADGRF4Q8IZF3 695 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 FBXW8Q8N3Y1 598 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 ZNF611Q8N823 705 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 LRRC57Q8N9N7 239 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 PAPD5Q8NDF8 572 aaKnown RBP3.73□□□□□ -1.81
TDP1-217ENST00000557782 AGBL3Q8NEM8 1001 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 TBC1D16Q8TBP0 767 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 Q8TCH9 128 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 BICD2Q8TD16 824 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CTNNBL1Q8WYA6 563 aaPredicted RBP3.73□□□□□ -1.81
TDP1-217ENST00000557782 RIT1Q92963 219 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 MOB3AQ96BX8 217 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CFAP36Q96G28 342 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 ZNF560Q96MR9 790 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 SFXN2Q96NB2 322 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 ADOQ96SZ5 270 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 FEVQ99581 238 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 OLFM1Q99784 485 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 CPNE1Q99829 537 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 MACROD1Q9BQ69 325 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 TEX13AQ9BXU3 409 aaPredicted RBP3.73□□□□□ -1.81
TDP1-217ENST00000557782 LHPPQ9H008 270 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 P2RY12Q9H244 342 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 NGBQ9NPG2 151 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 PARPBPQ9NWS1 579 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 SLCO1C1Q9NYB5 712 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 RCOR1Q9UKL0 485 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 TSPAN16Q9UKR8 245 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 TTC7AQ9ULT0 858 aaPredicted RBP3.73□□□□□ -1.81
TDP1-217ENST00000557782 GRIP1Q9Y3R0 1128 aa3.73□□□□□ -1.81
TDP1-217ENST00000557782 FAM205AQ6ZU69 1335 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 ZNF335Q9H4Z2 1342 aaPredicted RBP3.72□□□□□ -1.81
TDP1-217ENST00000557782 CENPVL1A0A0U1RR11 272 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 ANKUB1A6NFN9 424 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 KPNA7A9QM74 516 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 POC1B-GALNT4F8VUJ3 575 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 HSPB6O14558 160 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 AP5Z1O43299 807 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 PPIP5K2O43314 1243 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 NUAK1O60285 661 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 FCGR3BO75015 233 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 TSC22D2O75157 780 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 TOP3BO95985 862 aaKnown RBP3.72□□□□□ -1.81
TDP1-217ENST00000557782 PDGFBP01127 241 aaPredicted RBP3.72□□□□□ -1.81
TDP1-217ENST00000557782 CYC1P08574 325 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 CHRM5P08912 532 aaPredicted RBP3.72□□□□□ -1.81
TDP1-217ENST00000557782 C1QTNF9P0C862 333 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 MYZAPP0CAP1 466 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 TSPY4P0CV99 314 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 TSPY10P0CW01 314 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 TPBGLP0DKB5 382 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 HSPA5P11021 654 aaKnown RBP3.72□□□□□ -1.81
TDP1-217ENST00000557782 MYL6BP14649 208 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 MAOAP21397 527 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 NR4A1P22736 598 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 HOXA7P31268 230 aaPredicted RBP3.72□□□□□ -1.81
TDP1-217ENST00000557782 HNRNPKP61978 463 aaKnown RBP eCLIP3.72□□□□□ -1.81
TDP1-217ENST00000557782 TCTE1Q5JU00 501 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 ENTPD8Q5MY95 495 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 DCST1Q5T197 706 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 LRRC38Q5VT99 294 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 NSUN5P2Q63ZY6 315 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 PRR27Q6MZM9 219 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 AFTPHQ6ULP2 937 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 CCDC73Q6ZRK6 1079 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 MARK2Q7KZI7 788 aaKnown RBP3.72□□□□□ -1.81
TDP1-217ENST00000557782 PRSS42Q7Z5A4 293 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 IRF2BP2Q7Z5L9 587 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 PM20D2Q8IYS1 436 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 SPATA6LQ8N4H0 392 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 SLC25A41Q8N5S1 370 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 HORMAD2Q8N7B1 307 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 BOLLQ8N9W6 283 aaKnown RBP3.72□□□□□ -1.81
TDP1-217ENST00000557782 CCNYQ8ND76 341 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 OR52E1Q8NGJ3 308 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 ACTRT2Q8TDY3 377 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 THRSPQ92748 146 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 ALG14Q96F25 216 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 C14orf79Q96F83 325 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 SAMD8Q96LT4 415 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 SPATA13Q96N96 652 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 PANX3Q96QZ0 392 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 THUMPD2Q9BTF0 503 aaKnown RBP3.72□□□□□ -1.81
TDP1-217ENST00000557782 TM2D2Q9BX73 214 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 RIBC2Q9H4K1 309 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 PPP1R3EQ9H7J1 279 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 TBC1D17Q9HA65 648 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 GPN1Q9HCN4 374 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms