RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 ENO2P09104 434 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 GSTM1P09488 218 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 NCF1P14598 390 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 MAPK9P45984 424 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 PRLHRP49683 370 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 NCALDP61601 193 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 GSTM4Q03013 218 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 CLCQ05315 142 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 HSPA14Q0VDF9 509 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 SFSWAPQ12872 951 aaKnown RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 GTF2H3Q13889 308 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 AGERQ15109 404 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 PCBP2Q15366 365 aaKnown RBP eCLIP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 SKIV2LQ15477 1246 aaKnown RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 BCL7AQ4VC05 210 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 KHDC1Q4VXA5 237 aaKnown RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 SLC9B1Q4ZJI4 515 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 SULT1C3Q6IMI6 304 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 CLYBLQ8N0X4 340 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 RASGEF1AQ8N9B8 481 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 OR56A4Q8NGH8 313 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 ZNF483Q8TF39 744 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 ASZ1Q8WWH4 475 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 ERLEC1Q96DZ1 483 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 NSL1Q96IY1 281 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 ZNF514Q96K75 400 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 FAM161BQ96MY7 647 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 CCM2Q9BSQ5 444 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 TRIM54Q9BYV2 358 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 PCTPQ9UKL6 214 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 CNOT6Q9ULM6 557 aaKnown RBP12.27□□□□□ -0.45
SHMT2-233ENST00000557529 STK38LQ9Y2H1 464 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 TRAF6Q9Y4K3 522 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 CKAP5Q14008 2032 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 BRWD1Q9NSI6 2320 aa12.27□□□□□ -0.45
SHMT2-233ENST00000557529 A0A1W2PP55 124 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 PABPN1LA6NDY0 278 aaKnown RBP12.26□□□□□ -0.45
SHMT2-233ENST00000557529 CFAP73A6NFT4 308 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 GIPC1O14908 333 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 INPP4BO15327 924 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 VEGFDO43915 354 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 CDK14O94921 469 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 PCDH8O95206 1070 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 TEAD1P28347 426 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 COPAP53621 1224 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 CDH13P55290 713 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 TAS2R38P59533 333 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 CDKL1Q00532 357 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 BOP1Q14137 746 aaKnown RBP12.26□□□□□ -0.45
SHMT2-233ENST00000557529 PDCD2Q16342 344 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-233ENST00000557529 TTC31Q49AM3 519 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-233ENST00000557529 SYTL3Q4VX76 610 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 VWA5B1Q5TIE3 1220 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 KIAA1211LQ6NV74 962 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 TTC23LQ6PF05 361 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 TMEM220Q6QAJ8 160 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 ADAMTSL4Q6UY14 1074 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 EFL1Q7Z2Z2 1120 aaKnown RBP12.26□□□□□ -0.45
SHMT2-233ENST00000557529 HOMEZQ8IX15 550 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 TCAIMQ8N3R3 496 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 MAPK15Q8TD08 544 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 TRPC4APQ8TEL6 797 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 GANCQ8TET4 914 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 GLMNQ92990 594 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 FAM131CQ96AQ9 280 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 EGFL8Q99944 293 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 NUF2Q9BZD4 464 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 TRIM39Q9HCM9 518 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 MID1IP1Q9NPA3 183 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 MRGBPQ9NV56 204 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 FBXL12Q9NXK8 326 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 UTP6Q9NYH9 597 aaKnown RBP12.26□□□□□ -0.45
SHMT2-233ENST00000557529 TSR3Q9UJK0 312 aaKnown RBP12.26□□□□□ -0.45
SHMT2-233ENST00000557529 ADAMTS6Q9UKP5 1117 aa12.26□□□□□ -0.45
SHMT2-233ENST00000557529 COL4A2P08572 1712 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 A0A1W2PQF6 199 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 IGLON5A6NGN9 336 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 LRRC14BA6NHZ5 514 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 OR2AG2A6NM03 316 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 CAPN14A8MX76 684 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 TMEM233B4DJY2 109 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 UBFD1O14562 309 aaKnown RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 AZIN1O14977 448 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 ADAM23O75077 832 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 GPC4O75487 556 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 SLCO2B1O94956 709 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 HIST1H2AGP0C0S8 130 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 C7P10643 843 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 HIST1H2ADP20671 130 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 CYP2A7P20853 494 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 CALB2P22676 271 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 TARSP26639 723 aaKnown RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 CCR3P51677 355 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 INHBCP55103 352 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 PKNOX1P55347 436 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 SH3BP2P78314 561 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 PLOD1Q02809 727 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 CDC16Q13042 620 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 CCDC85BQ15834 202 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 EOGTQ5NDL2 527 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms