RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 TUBB4AP04350 444 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 PROS1P07225 676 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 MLNP12872 115 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 AMD1P17707 334 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 MGAT1P26572 445 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 RPL10P27635 214 aaKnown RBP8.18□□□□□ -1.1
PSEN1-223ENST00000557511 GRIA1P42261 906 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 MAPK9P45984 424 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 FASLGP48023 281 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 TTPAP49638 278 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 ETF1P62495 437 aaKnown RBP8.18□□□□□ -1.1
PSEN1-223ENST00000557511 CCL7P80098 99 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 CKAP4Q07065 602 aaKnown RBP8.18□□□□□ -1.1
PSEN1-223ENST00000557511 EIF3IQ13347 325 aaKnown RBP8.18□□□□□ -1.1
PSEN1-223ENST00000557511 THOC5Q13769 683 aaKnown RBP8.18□□□□□ -1.1
PSEN1-223ENST00000557511 ISXQ2M1V0 245 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 BCL7AQ4VC05 210 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 SYTL3Q4VX76 610 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 DNAJC21Q5F1R6 531 aaKnown RBP8.18□□□□□ -1.1
PSEN1-223ENST00000557511 PHF19Q5T6S3 580 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 AGAP9Q5VTM2 703 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 MRNIPQ6NTE8 343 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 TTC27Q6P3X3 843 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 KLHL35Q6PF15 583 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 FOXR1Q6PIV2 292 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 TREML4Q6UXN2 200 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 WASH2PQ6VEQ5 465 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 MAATS1Q7Z4T9 603 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 SPRED1Q7Z699 444 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 SFRP1Q8N474 314 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 PLPP7Q8NBV4 271 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 MCUQ8NE86 351 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 HM13Q8TCT9 377 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 SLC37A2Q8TED4 501 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 ZCCHC14Q8WYQ9 949 aaKnown RBP8.18□□□□□ -1.1
PSEN1-223ENST00000557511 TMEM159Q96B96 161 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 SGF29Q96ES7 293 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 CCM2Q9BSQ5 444 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 DDX47Q9H0S4 455 aaKnown RBP8.18□□□□□ -1.1
PSEN1-223ENST00000557511 MRM3Q9HC36 420 aaKnown RBP8.18□□□□□ -1.1
PSEN1-223ENST00000557511 EPB41L5Q9HCM4 733 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 WASH6PQ9NQA3 447 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 PRDM8Q9NQV8 689 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 CHRAC1Q9NRG0 131 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 KCND1Q9NSA2 647 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 CATSPERZQ9NTU4 200 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 CPNE7Q9UBL6 633 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 FAM8A1Q9UBU6 413 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 WASF3Q9UPY6 502 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 HEBP2Q9Y5Z4 205 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 MAD1L1Q9Y6D9 718 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 COLEC10Q9Y6Z7 277 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 LRRK1Q38SD2 2015 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 CACNA1AO00555 2505 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 PCNX2A6NKB5 2137 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 CCDC187A0A096LP49 1063 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 C17orf113A0A1B0GUU1 675 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 CCDC162PA2VCL2 907 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 AGAP14A8MT82 685 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 C1QTNF9BB2RNN3 333 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 D6RAR5 112 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 GOLGA8MH3BSY2 632 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 KIF2AO00139 706 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 GAPDHSO14556 408 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 GPR39O43194 453 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 POLBP06746 335 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 C1QTNF9P0C862 333 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 JMJD7P0C870 316 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 XRCC1P18887 633 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 NDUFS1P28331 727 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 MAGEA6P43360 314 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 PRLHRP49683 370 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 CTSCP53634 463 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 EPHA4P54764 986 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 DRG2P55039 364 aaKnown RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 CLDN6P56747 220 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 OR1D5P58170 312 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 GABREP78334 506 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 PLOD1Q02809 727 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 CYP4F3Q08477 520 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 DMPKQ09013 629 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 MSLNQ13421 630 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 PTK6Q13882 451 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 DHX34Q14147 1143 aaKnown RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 KCNJ11Q14654 390 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 PLCL1Q15111 1095 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 TMED2Q15363 201 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 DBN1Q16643 649 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 KHDC1Q4VXA5 237 aaKnown RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 RNF187Q5TA31 235 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 CDCP2Q5VXM1 449 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 IZUMO3Q5VZ72 239 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 PTRHD1Q6GMV3 140 aaKnown RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 ABRAXAS1Q6UWZ7 409 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 SYT10Q6XYQ8 523 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 C17orf82Q86X59 251 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 CREG2Q8IUH2 290 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 PLXDC1Q8IUK5 500 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 ZNF547Q8IVP9 402 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 CFAP206Q8IYR0 622 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms