RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 MAGEB3O15480 346 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 BMP10O95393 424 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 LDLRP01130 860 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 UGT1A1P22309 533 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 UGT1A4P22310 534 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 NFKBIAP25963 317 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 UGT1A3P35503 534 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 UGT1A5P35504 534 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 LAPTM5Q13571 262 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 NEDD8Q15843 81 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 SLC44A4Q53GD3 710 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 COQ5Q5HYK3 327 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 HECTD3Q5T447 861 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 TXNDC11Q6PKC3 985 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 HS3ST5Q8IZT8 346 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 CLHC1Q8NHS4 586 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 SEPT8Q92599 483 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 SGCDQ92629 289 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 KCNJ9Q92806 393 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 ISG20Q96AZ6 181 aaKnown RBP17.46■□□□□ 0.39
XRCC3-218ENST00000557439 C12orf43Q96C57 262 aaKnown RBP17.46■□□□□ 0.39
XRCC3-218ENST00000557439 ZNF382Q96SR6 550 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 TTPALQ9BTX7 342 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 IKZF5Q9H5V7 419 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 IPPKQ9H8X2 491 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 PHF24Q9UPV7 400 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 A0A087WXM4 84 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 ILVBLA1L0T0 632 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 TBKBP1A7MCY6 615 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 H0Y626 953 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 LSM1O15116 133 aaKnown RBP17.45■□□□□ 0.38
XRCC3-218ENST00000557439 TRIM16O95361 564 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 CST5P28325 142 aaPredicted RBP17.45■□□□□ 0.38
XRCC3-218ENST00000557439 RPL38P63173 70 aaKnown RBP17.45■□□□□ 0.38
XRCC3-218ENST00000557439 EMX2Q04743 252 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 PLD1Q13393 1074 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 GTF2H2Q13888 395 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 PHKG1Q16816 387 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 IRAK1BP1Q5VVH5 260 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 GPR107Q5VW38 600 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 GTF2H2CQ6P1K8 395 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 FAM126BQ8IXS8 530 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 PACRGLQ8N7B6 248 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 SLC22A12Q96S37 553 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 NPLQ9BXD5 320 aaPredicted RBP17.45■□□□□ 0.38
XRCC3-218ENST00000557439 ADGRE3Q9BY15 652 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 NTN4Q9HB63 628 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 RIC8BQ9NVN3 520 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 VAPAQ9P0L0 249 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 PCDH10Q9P2E7 1040 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 LHX3Q9UBR4 397 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 NEUROG3Q9Y4Z2 214 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 PIKFYVEQ9Y2I7 2098 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 H0Y858 1186 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 ATE1O95260 518 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 POLR2IP36954 125 aaKnown RBP17.45■□□□□ 0.38
XRCC3-218ENST00000557439 SH3BGRP55822 239 aaPredicted RBP17.45■□□□□ 0.38
XRCC3-218ENST00000557439 TUBA4AP68366 448 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 ITIH5Q86UX2 942 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 HID1Q8IV36 788 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 ERI1Q8IV48 349 aaKnown RBP17.45■□□□□ 0.38
XRCC3-218ENST00000557439 NAT16Q8N8M0 369 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 MTFMTQ96DP5 389 aaKnown RBP17.45■□□□□ 0.38
XRCC3-218ENST00000557439 NSMCE2Q96MF7 247 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 C17orf80Q9BSJ5 609 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 TBCDQ9BTW9 1192 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 SEZ6LQ9BYH1 1024 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 P2RY12Q9H244 342 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 POLR1BQ9H9Y6 1135 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 TLR9Q9NR96 1032 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 HACD3Q9P035 362 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 IL17CQ9P0M4 197 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 THEGQ9P2T0 379 aa17.45■□□□□ 0.38
XRCC3-218ENST00000557439 ARIH1Q9Y4X5 557 aaPredicted RBP17.45■□□□□ 0.38
XRCC3-218ENST00000557439 A0A1B0GVM2 712 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 TBL1XO60907 577 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 SLC2A4P14672 509 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 CAPGP40121 348 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 KPNA1P52294 538 aaPredicted RBP17.44■□□□□ 0.38
XRCC3-218ENST00000557439 EEFSECP57772 596 aaKnown RBP17.44■□□□□ 0.38
XRCC3-218ENST00000557439 RHOAP61586 193 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 GTDC1Q4AE62 458 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 KCTD21Q4G0X4 260 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 PTRHD1Q6GMV3 140 aaKnown RBP17.44■□□□□ 0.38
XRCC3-218ENST00000557439 NCEH1Q6PIU2 408 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 TMEM26Q6ZUK4 368 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 PAF1Q8N7H5 531 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 OR10Q1Q8NGQ4 319 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 FBXO30Q8TB52 745 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 FIG4Q92562 907 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 DTNBP1Q96EV8 351 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 HSPBAP1Q96EW2 488 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 LRRC3Q9BY71 257 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 ZIM2Q9NZV7 527 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 ZNF711Q9Y462 761 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 SLC30A1Q9Y6M5 507 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 THSD7BQ9C0I4 1608 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 TAPBPO15533 448 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 FFAR2O15552 330 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 SMAD6O43541 496 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms