RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 MCCC1Q96RQ3 725 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 ANP32EQ9BTT0 268 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 TEX101Q9BY14 249 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 WDR26Q9H7D7 661 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 NT5MQ9NPB1 228 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 RBM22Q9NW64 420 aaKnown RBP eCLIP9.78□□□□□ -0.844e-42■■■■■ 28.1
HNRNPC-228ENST00000557033 DNPEPQ9ULA0 475 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 RAI2Q9Y5P3 530 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 GPR45Q9Y5Y3 372 aa9.78□□□□□ -0.84
HNRNPC-228ENST00000557033 SHROOM3Q8TF72 1996 aa9.77□□□□□ -0.84
HNRNPC-228ENST00000557033 AKR1B15C9JRZ8 316 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 F5H423 210 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 TMX2-CTNND1H3BSU7 103 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 MFSD11O43934 449 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 USP12O75317 370 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 TUSC2O75896 110 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 ALX3O95076 343 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 PDHA1P08559 390 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 PNLIPP16233 465 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 ZFXP17010 805 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 ZNF30P17039 623 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 LHCGRP22888 699 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 PTX3P26022 381 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 GJC1P36383 396 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 RPL26P61254 145 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 TBX2Q13207 712 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 COL28A1Q2UY09 1125 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 C19orf48Q6RUI8 117 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 RBM44Q6ZP01 1051 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 C22orf34Q6ZV56 151 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 HSD11B1LQ7Z5J1 315 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 TECPR1Q7Z6L1 1165 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 OR1E3Q8WZA6 343 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 RAPGEF5Q92565 580 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 DTD2Q96FN9 168 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 ZNF578Q96N58 590 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 ZNF830Q96NB3 372 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 PTCHD1Q96NR3 888 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 CCDC3Q9BQI4 270 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 MAK16Q9BXY0 300 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 POLR1BQ9H9Y6 1135 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 ACSS2Q9NR19 701 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 PHPT1Q9NRX4 125 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 GULP1Q9UBP9 304 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 GTF2A1LQ9UNN4 478 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 RPL26L1Q9UNX3 145 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 GPR34Q9UPC5 381 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 PCDHB1Q9Y5F3 818 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 ZFHX4Q86UP3 3567 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 CFAP47Q6ZTR5 3102 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 IGF2RP11717 2491 aa9.77□□□□□ -0.85
HNRNPC-228ENST00000557033 A0A0J9YYE9 177 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 C7orf72A4D263 438 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 NPIPB15A6NHN6 443 aaPredicted RBP9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 TLX3O43711 291 aaPredicted RBP9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 TRBC1P01850 177 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 PYGLP06737 847 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 CELA2BP08218 269 aaPredicted RBP9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 GLB1P16278 677 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 CD40P25942 277 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 ERVPABLB-1P60509 514 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 RPL11P62913 178 aaKnown RBP9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 GBE1Q04446 702 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 PPIDQ08752 370 aaKnown RBP9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 SLC10A2Q12908 348 aaPredicted RBP9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 SEMA5AQ13591 1074 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 PEX6Q13608 980 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 TBC1D25Q3MII6 688 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 DENND2CQ68D51 928 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 SLC9A4Q6AI14 798 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 CCDC70Q6NSX1 233 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 SARM1Q6SZW1 724 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 CRTC1Q6UUV9 634 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 Q6ZVL8 140 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 ZNF765Q7L2R6 523 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 TAF8Q7Z7C8 310 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 PTRH1Q86Y79 214 aaKnown RBP9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 RHOT1Q8IXI2 618 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 CCDC13Q8IYE1 715 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 NRSN1Q8IZ57 195 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 CCNYQ8ND76 341 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 FAM46DQ8NEK8 389 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 GPR156Q8NFN8 814 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 ARRDC2Q8TBH0 407 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 C1GALT1C1Q96EU7 318 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 PDXPQ96GD0 296 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 SGCZQ96LD1 299 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 TDRD1Q9BXT4 1180 aaKnown RBP9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 BRD8Q9H0E9 1235 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 FGF22Q9HCT0 170 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 MRPL40Q9NQ50 206 aaKnown RBP9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 TRNAU1APQ9NX07 287 aaKnown RBP9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 DTLQ9NZJ0 730 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 ADGRE2Q9UHX3 823 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 APPL1Q9UKG1 709 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 LRP4O75096 1905 aa9.76□□□□□ -0.85
HNRNPC-228ENST00000557033 PRSS38A1L453 326 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 LRRD1A4D1F6 860 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 RGSL1A5PLK6 1076 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 C3orf70A6NLC5 250 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms