RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 C9orf72Q96LT7 481 aa10.58□□□□□ -0.72
XRCC3-216ENST00000556682 TGM7Q96PF1 710 aa10.58□□□□□ -0.72
XRCC3-216ENST00000556682 CCM2Q9BSQ5 444 aa10.58□□□□□ -0.72
XRCC3-216ENST00000556682 EFHD1Q9BUP0 239 aa10.58□□□□□ -0.72
XRCC3-216ENST00000556682 TRIT1Q9H3H1 467 aaKnown RBP10.58□□□□□ -0.72
XRCC3-216ENST00000556682 VPS37BQ9H9H4 285 aa10.58□□□□□ -0.72
XRCC3-216ENST00000556682 EPHA6Q9UF33 1036 aa10.58□□□□□ -0.72
XRCC3-216ENST00000556682 PSMD13Q9UNM6 376 aa10.58□□□□□ -0.72
XRCC3-216ENST00000556682 ZNF148Q9UQR1 794 aa10.58□□□□□ -0.72
XRCC3-216ENST00000556682 WDR37Q9Y2I8 494 aa10.58□□□□□ -0.72
XRCC3-216ENST00000556682 R3HDM2Q9Y2K5 976 aaKnown RBP10.58□□□□□ -0.72
XRCC3-216ENST00000556682 COLEC10Q9Y6Z7 277 aa10.58□□□□□ -0.72
XRCC3-216ENST00000556682 ZFYVE26Q68DK2 2539 aa10.58□□□□□ -0.72
XRCC3-216ENST00000556682 KIF26BQ2KJY2 2108 aa10.58□□□□□ -0.72
XRCC3-216ENST00000556682 C17orf113A0A1B0GUU1 675 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 H7C0S8 307 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 LDB2O43679 373 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 RAD1O60671 282 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 METTL18O95568 372 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 IFNB1P01574 187 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 ITGB2P05107 769 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 SLC35G4P0C7Q5 338 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 TPH1P17752 444 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 MAP4P27816 1152 aaKnown RBP10.57□□□□□ -0.72
XRCC3-216ENST00000556682 GDF10P55107 478 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 GFERP55789 205 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 CACNG1Q06432 222 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 FOXM1Q08050 763 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 CDH17Q12864 832 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 SEPT6Q14141 434 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 KRT33BQ14525 404 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 POU6F1Q14863 301 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 ZRANB3Q5FWF4 1079 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 CACHD1Q5VU97 1274 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 ARMC6Q6NXE6 501 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 IRGCQ6NXR0 463 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 FAM83HQ6ZRV2 1179 aaPredicted RBP10.57□□□□□ -0.72
XRCC3-216ENST00000556682 PRSS42Q7Z5A4 293 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 VASH2Q86V25 355 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 CFAP206Q8IYR0 622 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 CACNA2D3Q8IZS8 1091 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 NLGN4XQ8N0W4 816 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 CCDC89Q8N998 374 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 NLGN4YQ8NFZ3 816 aaPredicted RBP10.57□□□□□ -0.72
XRCC3-216ENST00000556682 MAIP1Q8WWC4 291 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 JPH3Q8WXH2 748 aaPredicted RBP10.57□□□□□ -0.72
XRCC3-216ENST00000556682 NKD1Q969G9 470 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.57□□□□□ -0.725e-6■■■■□ 22.9
XRCC3-216ENST00000556682 KIAA1143Q96AT1 154 aaPredicted RBP10.57□□□□□ -0.72
XRCC3-216ENST00000556682 DNAJC1Q96KC8 554 aaKnown RBP10.57□□□□□ -0.72
XRCC3-216ENST00000556682 C12orf66Q96MD2 445 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 TTC1Q99614 292 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 ARHGAP9Q9BRR9 750 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 RAB33BQ9H082 229 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 IMP3Q9NV31 184 aaKnown RBP10.57□□□□□ -0.72
XRCC3-216ENST00000556682 NLE1Q9NVX2 485 aaPredicted RBP10.57□□□□□ -0.72
XRCC3-216ENST00000556682 ZDHHC3Q9NYG2 299 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 OGFRQ9NZT2 677 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 HEBP2Q9Y5Z4 205 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 PTPRQQ9UMZ3 2332 aa10.57□□□□□ -0.72
XRCC3-216ENST00000556682 TCRBV7S2A1N4TA0A589 114 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 F8W8V4 182 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 QSOX1O00391 747 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 IFRD1O00458 451 aaPredicted RBP10.56□□□□□ -0.72
XRCC3-216ENST00000556682 LIASO43766 372 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 AP2A2O94973 939 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 POLBP06746 335 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 GSTM1P09488 218 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 MTHFD1P11586 935 aaKnown RBP10.56□□□□□ -0.72
XRCC3-216ENST00000556682 ACRV1P26436 265 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 NDUFS1P28331 727 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 CA5AP35218 305 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 PRLHRP49683 370 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 SEPHS1P49903 392 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 GSTM4Q03013 218 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 IL11RAQ14626 422 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 OASLQ15646 514 aaKnown RBP10.56□□□□□ -0.72
XRCC3-216ENST00000556682 MEI1Q5TIA1 1274 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 KIAA1614Q5VZ46 1190 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 C4orf22Q6V702 233 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 PPP1R21Q6ZMI0 780 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 ZNF662Q6ZS27 426 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 TAB3Q8N5C8 712 aaPredicted RBP10.56□□□□□ -0.72
XRCC3-216ENST00000556682 TRIM58Q8NG06 486 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 HM13Q8TCT9 377 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 ATG4AQ8WYN0 398 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 UBXN4Q92575 508 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 TTC9Q92623 222 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 RSC1A1Q92681 617 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 PMEPA1Q969W9 287 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 CDKN2AIPNLQ96HQ2 116 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 INSM2Q96T92 566 aaPredicted RBP10.56□□□□□ -0.72
XRCC3-216ENST00000556682 CTRCQ99895 268 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 WWP1Q9H0M0 922 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 ZNF768Q9H5H4 540 aaKnown RBP10.56□□□□□ -0.72
XRCC3-216ENST00000556682 FAM96AQ9H5X1 160 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 ETNK1Q9HBU6 452 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 LZTFL1Q9NQ48 299 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 PAK5Q9P286 719 aa10.56□□□□□ -0.72
XRCC3-216ENST00000556682 FAM8A1Q9UBU6 413 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms