RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 KXD1Q9BQD3 176 aa18.03■□□□□ 0.48
SDR39U1-220ENST00000556548 NOL11Q9H8H0 719 aaKnown RBP18.03■□□□□ 0.48
SDR39U1-220ENST00000556548 CCDC167Q9P0B6 97 aa18.03■□□□□ 0.48
SDR39U1-220ENST00000556548 FADS2P1A8MWK0 482 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 RAD51BO15315 384 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 KRT36O76013 467 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 OR56A5P0C7T3 313 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 ELFN1P0C7U0 828 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 HYAL1Q12794 435 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 BOP1Q14137 746 aaKnown RBP18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 TCHHL1Q5QJ38 904 aaPredicted RBP18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 C9orf64Q5T6V5 341 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 ZDHHC20Q5W0Z9 365 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 CHSY3Q70JA7 882 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 OR9I1Q8NGQ6 314 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 HMGCLL1Q8TB92 370 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 STON2Q8WXE9 905 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 ULK4Q96C45 1275 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 DCUN1D1Q96GG9 259 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 PANX3Q96QZ0 392 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 LMAN2LQ9H0V9 348 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 RNPEPL1Q9HAU8 725 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 DZANK1Q9NVP4 752 aa18.02■□□□□ 0.48
SDR39U1-220ENST00000556548 TSPAN11A1L157 253 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 OR2AG2A6NM03 316 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 KATNA1O75449 491 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 CIB2O75838 187 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 OR4F21O95013 312 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 ALDOCP09972 364 aaKnown RBP18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 ATP1B2P14415 290 aaPredicted RBP18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 TBL3Q12788 808 aaKnown RBP18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 AGKQ53H12 422 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 C1orf146Q5VVC0 180 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 RIPOR1Q6ZS17 1223 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 CDYL2Q8N8U2 506 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 OR56A4Q8NGH8 313 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 KCNV2Q8TDN2 545 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 TUBGCP3Q96CW5 907 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 C1QTNF3Q9BXJ4 246 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 KCTD5Q9NXV2 234 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 PIKFYVEQ9Y2I7 2098 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 IGLV3-16A0A075B6K0 115 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 TAPBPO15533 448 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 MLYCDO95822 493 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 MMP12P39900 470 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 TTLL9Q3SXZ7 439 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 ERAP2Q6P179 960 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 DPPA4Q7L190 304 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 VRK3Q8IV63 474 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 CFAP61Q8NHU2 1237 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 PIP4K2CQ8TBX8 421 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 OARD1Q9Y530 152 aa18.01■□□□□ 0.47
SDR39U1-220ENST00000556548 PSMD12O00232 456 aaPredicted RBP18■□□□□ 0.47
SDR39U1-220ENST00000556548 GIPC1O14908 333 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 INPP4BO15327 924 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 CFLARO15519 480 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 CCNT2O60583 730 aaKnown RBP18■□□□□ 0.47
SDR39U1-220ENST00000556548 ESRRBO95718 433 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 ERVPABLB-1P60509 514 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 FASTKQ14296 549 aaKnown RBP18■□□□□ 0.47
SDR39U1-220ENST00000556548 HNRNPA1L2Q32P51 320 aaKnown RBP18■□□□□ 0.47
SDR39U1-220ENST00000556548 LIPIQ6XZB0 460 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 GPRIN3Q6ZVF9 776 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 GOLGA7Q7Z5G4 137 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 CACUL1Q86Y37 369 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 HPS6Q86YV9 775 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 DSELQ8IZU8 1212 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 KIRREL3Q8IZU9 778 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 TERB1Q8NA31 727 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 DTX3LQ8TDB6 740 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 ATP6V1E2Q96A05 226 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 ARRDC3Q96B67 414 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 LRIG1Q96JA1 1093 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 SLC45A3Q96JT2 553 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 MYADMQ96S97 322 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 DKK3Q9UBP4 350 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 SUN2Q9UH99 717 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 POLG2Q9UHN1 485 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 CDH7Q9ULB5 785 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 PLXNB3Q9ULL4 1909 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 KRT87PA6NCN2 255 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 RPSAP08865 295 aaKnown RBP18■□□□□ 0.47
SDR39U1-220ENST00000556548 ENO3P13929 434 aaPredicted RBP18■□□□□ 0.47
SDR39U1-220ENST00000556548 RUNX3Q13761 415 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 SQLEQ14534 574 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 PDGFRLQ15198 375 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 KIF19Q2TAC6 998 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 LETMD1Q6P1Q0 360 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 PAOXQ6QHF9 649 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 KYQ8NBH2 561 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 ITFG2Q969R8 447 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 MRPL38Q96DV4 380 aaKnown RBP18■□□□□ 0.47
SDR39U1-220ENST00000556548 HBEGFQ99075 208 aa18■□□□□ 0.47
SDR39U1-220ENST00000556548 PRNPP04156 253 aa17.99■□□□□ 0.47
SDR39U1-220ENST00000556548 MSH3P20585 1137 aa17.99■□□□□ 0.47
SDR39U1-220ENST00000556548 GJA4P35212 333 aa17.99■□□□□ 0.47
SDR39U1-220ENST00000556548 OPRD1P41143 372 aa17.99■□□□□ 0.47
SDR39U1-220ENST00000556548 SESN3P58005 492 aa17.99■□□□□ 0.47
SDR39U1-220ENST00000556548 GTF2H2Q13888 395 aa17.99■□□□□ 0.47
SDR39U1-220ENST00000556548 RCN1Q15293 331 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms